RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 FAM86B1E9PN63 330 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 SERPING1P05155 500 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 FAM86B2P0C5J1 330 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 CASP4P49662 377 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 FOXR1Q6PIV2 292 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 FAM76AQ8TAV0 307 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 WRNIP1Q96S55 665 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 YY1AP1Q9H869 796 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 CEP72Q9P209 647 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 NFU1Q9UMS0 254 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 PCNTO95613 3336 aa13.21□□□□□ -0.3
CAPRIN1-202ENST00000389645 HSF2BPO75031 334 aa13.21□□□□□ -0.3
CAPRIN1-202ENST00000389645 LMNB1P20700 586 aa13.21□□□□□ -0.3
CAPRIN1-202ENST00000389645 CCNI2Q6ZMN8 369 aaPredicted RBP13.21□□□□□ -0.3
CAPRIN1-202ENST00000389645 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.3
CAPRIN1-202ENST00000389645 A0A1W2PQJ5 194 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 PPP1R12BO60237 982 aaPredicted RBP13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 HEXIM1O94992 359 aaKnown RBP13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 NMT1P30419 496 aaKnown RBP13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 TMEM119Q4V9L6 283 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 ZC2HC1CQ53FD0 456 aaPredicted RBP13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 CREG2Q8IUH2 290 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 BAP1Q92560 729 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 AP1M1Q9BXS5 423 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 HPCAL4Q9UM19 191 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 CEP83Q9Y592 693 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 GFPT2O94808 682 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 LDHDQ86WU2 507 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 MED4Q9NPJ6 270 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
CAPRIN1-202ENST00000389645 LRRN2O75325 713 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 ORC2Q13416 577 aaPredicted RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 LLGL1Q15334 1064 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 RPS6KA1Q15418 735 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 FIGNQ5HY92 759 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 LRCH2Q5VUJ6 765 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 GAS7O60861 476 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 GNA14O95837 355 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 GUCY2CP25092 1073 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 WDR93Q6P2C0 686 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 RNF181Q9P0P0 153 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 TMEM110-MUSTN1A8MSY1 372 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 CALUO43852 315 aaPredicted RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 FLOT1O75955 427 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 AFPP02771 609 aaKnown RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 RPL13P26373 211 aaKnown RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 PTK2Q05397 1052 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 KNOP1Q1ED39 458 aaKnown RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 WNK4Q96J92 1243 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 NAP1L4Q99733 375 aaKnown RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 RUSC1Q9BVN2 902 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 GLT8D2Q9H1C3 349 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 RAVER2Q9HCJ3 691 aaKnown RBP13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 STIM2Q9P246 746 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 FAM184BQ9ULE4 1060 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 ZHX2Q9Y6X8 837 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 ARFGEF1Q9Y6D6 1849 aa13.19□□□□□ -0.3
CAPRIN1-202ENST00000389645 TLR2O60603 784 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 USP11P51784 963 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 CFAP58Q5T655 872 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 ALKBH5Q6P6C2 394 aaKnown RBP13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 HS2ST1Q7LGA3 356 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 SYT17Q9BSW7 474 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 TLR10Q9BXR5 811 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 CTDP1Q9Y5B0 961 aaPredicted RBP13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 NR3C1P04150 777 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 YBX3P16989 372 aaKnown RBP eCLIP13.18□□□□□ -0.32e-7■□□□□ 9.7
CAPRIN1-202ENST00000389645 HPDP32754 393 aaPredicted RBP13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 SP4Q02446 784 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 GOLGA5Q8TBA6 731 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 DYDC2Q96IM9 177 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 PCIF1Q9H4Z3 704 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 FEM1BQ9UK73 627 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 CCPG1Q9ULG6 757 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 POLR2AP24928 1970 aaKnown RBP13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 NFIBO00712 420 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 MSH4O15457 936 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 TRIM49P0CI25 452 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 TRIM49CP0CI26 452 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 CARSP49589 748 aaKnown RBP13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 SEMA3FQ13275 785 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 ODF2Q5BJF6 829 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 ARSHQ5FYA8 562 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 DAAM2Q86T65 1068 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 FAM178BQ8IXR5 827 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 GPC2Q8N158 579 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 CRYGNQ8WXF5 182 aa13.18□□□□□ -0.3
CAPRIN1-202ENST00000389645 EXOC3O60645 756 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 AKAP3O75969 853 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 ALAS1P13196 640 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms