RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 APOBEC3FQ8IUX4 373 aaKnown RBP20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 INTS9Q9NV88 658 aaKnown RBP20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 PPP1R2P41236 205 aa20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 ADD3Q9UEY8 706 aaKnown RBP20.44■□□□□ 0.86
PPFIA1-202ENST00000389547 EXOC3O60645 756 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 PDHA1P08559 390 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 SLC9C1Q4G0N8 1177 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 TCP11X2Q5H9J9 407 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 ODR4Q5SWX8 454 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 SLC30A10Q6XR72 485 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 PPFIBP2Q8ND30 876 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 CYFIP2Q96F07 1278 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 RGL1Q9NZL6 768 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 IREB2P48200 963 aaKnown RBP20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 FAM102BQ5T8I3 360 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 PSMD1Q99460 953 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 CUEDC2Q9H467 287 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 SLC37A4O43826 429 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 MYCBPAPQ8TBZ2 947 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 CTNNBL1Q8WYA6 563 aaPredicted RBP20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 STK17AQ9UEE5 414 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 DMGDHQ9UI17 866 aaKnown RBP20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 PLCH1Q4KWH8 1693 aa20.43■□□□□ 0.86
PPFIA1-202ENST00000389547 PTGISQ16647 500 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 EPB41P11171 864 aaKnown RBP20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 TMOD1P28289 359 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 FRMD4BQ9Y2L6 1034 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 FCER1AP12319 257 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 MMP14P50281 582 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 LRRC23Q53EV4 343 aaPredicted RBP20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 ARMC9Q7Z3E5 817 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 CDAN1Q8IWY9 1227 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 ARHGEF2Q92974 986 aaKnown RBP20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 P2RX5Q93086 422 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 CNOT6LQ96LI5 555 aaKnown RBP20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 ATP8A1Q9Y2Q0 1164 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 ADAM9Q13443 819 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 RASIP1Q5U651 963 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 ADAT2Q7Z6V5 191 aaKnown RBP20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 GBP5Q96PP8 586 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 RIOX1Q9H6W3 641 aa20.42■□□□□ 0.86
PPFIA1-202ENST00000389547 ANO9A1A5B4 782 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 PHF20L1A8MW92 1017 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 CLIC2O15247 247 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 MAGOHP61326 146 aaKnown RBP20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 ERVK-24P63145 666 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 SPDYE2Q495Y8 402 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 MAGOHBQ96A72 148 aaKnown RBP20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 KRIT1O00522 736 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 WNT7AO00755 349 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 FAM107AO95990 144 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 VIL1P09327 827 aaKnown RBP20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 DENND2CQ68D51 928 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 TBC1D5Q92609 795 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 OSBPL9Q96SU4 736 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 ELP3Q9H9T3 547 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 MTRF1LQ9UGC7 380 aaKnown RBP20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 GGT7Q9UJ14 662 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 SETSIPP0DME0 302 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 LMNB1P20700 586 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 AARSP49588 968 aaKnown RBP eCLIP20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 PPP1R18Q6NYC8 613 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 WHAMMQ8TF30 809 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 SLC10A4Q96EP9 437 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 RASAL2Q9UJF2 1139 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 COL4A3BPQ9Y5P4 624 aa20.41■□□□□ 0.86
PPFIA1-202ENST00000389547 MB21D1Q8N884 522 aa20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 GLIS2Q9BZE0 524 aaPredicted RBP20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 BATF3Q9NR55 127 aa20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 EVI5O60447 810 aa20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 EIF4A3P38919 411 aaKnown RBP20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 DHX9Q08211 1270 aaKnown RBP20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 SLC30A9Q6PML9 568 aa20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 NOD2Q9HC29 1040 aa20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 LAMB4A4D0S4 1761 aa20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 DRP2Q13474 957 aa20.4■□□□□ 0.86
PPFIA1-202ENST00000389547 ACTN4O43707 911 aaKnown RBP20.39■□□□□ 0.86
PPFIA1-202ENST00000389547 MYBL1P10243 752 aa20.39■□□□□ 0.86
PPFIA1-202ENST00000389547 CDC25CP30307 473 aa20.39■□□□□ 0.86
PPFIA1-202ENST00000389547 PREPLQ4J6C6 727 aaPredicted RBP20.39■□□□□ 0.86
PPFIA1-202ENST00000389547 WDR11Q9BZH6 1224 aa20.39■□□□□ 0.86
PPFIA1-202ENST00000389547 FHDC1Q9C0D6 1143 aaPredicted RBP20.39■□□□□ 0.86
PPFIA1-202ENST00000389547 EHD2Q9NZN4 543 aa20.39■□□□□ 0.86
PPFIA1-202ENST00000389547 PCDHA13Q9Y5I0 950 aa20.39■□□□□ 0.86
PPFIA1-202ENST00000389547 RPS12P25398 132 aaKnown RBP20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 FUT2Q10981 343 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 TRAPPC11Q7Z392 1133 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 ZNF280CQ8ND82 737 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 OR2W6PQ8NHA6 318 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 ATG4CQ96DT6 458 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 INTS13Q9NVM9 706 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 LARSQ9P2J5 1176 aaKnown RBP20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 PRPF6O94906 941 aaKnown RBP20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 FGRP09769 529 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 ZBED6P86452 979 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 ZBTB16Q05516 673 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 RNF217Q8TC41 542 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 CCHCR1Q8TD31 782 aa20.39■□□□□ 0.85
PPFIA1-202ENST00000389547 K7ENM7 598 aa20.38■□□□□ 0.85
PPFIA1-202ENST00000389547 IPO5O00410 1097 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms