RNA–Protein interactions for RNA: ENST00000389428.7

SEMA6D-206, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-206ENST00000389428 SYNGAP1Q96PV0 1343 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 POTEB3A0JP26 581 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 SEC31AO94979 1220 aaKnown RBP12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 GDF11O95390 407 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 EIF4A3P38919 411 aaKnown RBP12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 NT5C2P49902 561 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 ZBED6P86452 979 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 POTEBQ6S5H4 581 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 DCAF4Q8WV16 495 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 OPTNQ96CV9 577 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 ZNF496Q96IT1 587 aaPredicted RBP12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 ZFP69BQ9UJL9 534 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 GPC3P51654 580 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 TFDP2Q14188 446 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 PDXDC2PQ6P474 469 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 TRIM54Q9BYV2 358 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 SYTL2Q9HCH5 934 aa12.77□□□□□ -0.37
SEMA6D-206ENST00000389428 MYOM2P54296 1465 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 ASAP2O43150 1006 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 PHKA2P46019 1235 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 EXOC4Q96A65 974 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 PPP1R16BQ96T49 567 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 SP110Q9HB58 689 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 NPC1L1Q9UHC9 1359 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 SKOR1P84550 965 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 RGS9BPQ6ZS82 235 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 TOPORSQ9NS56 1045 aaPredicted RBP12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 GIMAP4Q9NUV9 329 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 MMP1P03956 469 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 CATSPER4Q7RTX7 472 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 PODNQ7Z5L7 613 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 SSH3Q8TE77 659 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 NOP53Q9NZM5 478 aaKnown RBP12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 POLIQ9UNA4 740 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 ABCC4O15439 1325 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 PNMA6FA0A0J9YX94 578 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 PRPF3O43395 683 aaKnown RBP12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 MORF4L2Q15014 288 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 USPL1Q5W0Q7 1092 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 CASS4Q9NQ75 786 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 INPP5FQ9Y2H2 1132 aa12.76□□□□□ -0.37
SEMA6D-206ENST00000389428 DENND3A2RUS2 1198 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 MYBL1P10243 752 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 CDKL3Q8IVW4 592 aaPredicted RBP12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 TTC17Q96AE7 1141 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 EGFL8Q99944 293 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 DYRK4Q9NR20 520 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 CCDC188H7C350 402 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 CCNE1P24864 410 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 ZMYM1Q5SVZ6 1142 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 NUDT18Q6ZVK8 323 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 ZNF467Q7Z7K2 595 aaPredicted RBP12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 CYTH2Q99418 400 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 DDX56Q9NY93 547 aaKnown RBP12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 PPARGC1AQ9UBK2 798 aaKnown RBP12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 GYG2O15488 501 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 HUS1O60921 280 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 ZFXP17010 805 aaPredicted RBP12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 HSPA2P54652 639 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 AP2B1P63010 937 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 YAF2Q8IY57 180 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 AP3B2Q13367 1082 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 DYNC1I2Q13409 638 aaKnown RBP12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 TTC39CQ8N584 583 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 TSC22D3Q99576 134 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 ARIH2O95376 493 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 CARSP49589 748 aaKnown RBP12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 CEP70Q8NHQ1 597 aa12.75□□□□□ -0.37
SEMA6D-206ENST00000389428 GSPT1P15170 499 aaKnown RBP12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 AARS2Q5JTZ9 985 aaKnown RBP12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 SLC10A5Q5PT55 438 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 ACRBPQ8NEB7 543 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 PITPNM3Q9BZ71 974 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 OLFML3Q9NRN5 406 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 CFAP43Q8NDM7 1665 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 A0A0G2JND7 137 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 MIF4GDA9UHW6 222 aaKnown RBP12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 GTF2H3Q13889 308 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 KYAT1Q16773 422 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 LRRC24Q50LG9 513 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 RRM2BQ7LG56 351 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 AFG1LQ8WV93 481 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 NLRP4Q96MN2 994 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 CARD14Q9BXL6 1004 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 SLC16A2P36021 539 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 ZNF699Q32M78 642 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 AP1M1Q9BXS5 423 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 CHUKO15111 745 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 SERPINB10P48595 397 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 STXBP2Q15833 593 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 EPM2AIP1Q7L775 607 aaPredicted RBP12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
SEMA6D-206ENST00000389428 PLAAQ9Y263 795 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms