RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 BYSLQ13895 437 aaKnown RBP13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 RABGAP1LQ5R372 815 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 FAF2Q96CS3 445 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 CYFIP2Q96F07 1278 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 ADNPQ9H2P0 1102 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 CD248Q9HCU0 757 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 FBXL5Q9UKA1 691 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 HACE1Q8IYU2 909 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 PBXIP1Q96AQ6 731 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 TEKT3Q9BXF9 490 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 IL1RAPL1Q9NZN1 696 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 ADGRG1Q9Y653 693 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 TMCC1O94876 653 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 SNUPNO95149 360 aaKnown RBP13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 ZBED1O96006 694 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 BTNL9Q6UXG8 535 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 CLEC17AQ6ZS10 378 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 PICK1Q9NRD5 415 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 FRMPD2Q68DX3 1309 aaPredicted RBP13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 TRPM1Q7Z4N2 1603 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 DYTNA2CJ06 578 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 NEURL1BA8MQ27 555 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 C4orf50Q6ZRC1 276 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 WDR24Q96S15 920 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 RPS6KC1Q96S38 1066 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 GFPT1Q06210 699 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 CDR2LQ86X02 465 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 CASP10Q92851 521 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 USP44Q9H0E7 712 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 HORMAD1Q86X24 394 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 DDX42Q86XP3 938 aaKnown RBP eCLIP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 KIF2CQ99661 725 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 WWP1Q9H0M0 922 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 SNX25Q9H3E2 840 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 NOD2Q9HC29 1040 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 PAMP19021 973 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 DSG1Q02413 1049 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 DHX34Q14147 1143 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 FAM187AA6NFU0 413 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 WDR64B1ANS9 1081 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 CHN1P15882 459 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 ACADSP16219 412 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 ZNF555Q8NEP9 628 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 TEKT4Q8WW24 435 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 SYNJ2BP-COX16A0A087WUM0 186 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 HNRNPDLO14979 420 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 PRPSAP2O60256 369 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 AGTP01019 485 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 ARL4AP40617 200 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 CAPRIN1Q14444 709 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 PARP10Q53GL7 1025 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 NAIF1Q69YI7 327 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 SPATA4Q8NEY3 305 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 COX16Q9P0S2 106 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 LCMT1Q9UIC8 334 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 SLC13A4Q9UKG4 626 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 GGPS1O95749 300 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 FAM107AO95990 144 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 ABCD1P33897 745 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 VHLP40337 213 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 CHRNA2Q15822 529 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 ARHGEF10O15013 1369 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 C16orf96A6NNT2 1141 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 SEC24DO94855 1032 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 MARK3P27448 753 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 LRRC41Q15345 812 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 TRIM16LQ309B1 348 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 POTEAQ6S8J7 498 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 TMEM206Q9H813 350 aa13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 MAGED2Q9UNF1 606 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-202ENST00000383836 CCT8L1PA6NM43 557 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 PLCG1P19174 1290 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 ZC3H12BQ5HYM0 836 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 LRRC59Q96AG4 307 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 KCNF1Q9H3M0 494 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 OLFML3Q9NRN5 406 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 UTP6Q9NYH9 597 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 SH3TC1Q8TE82 1336 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 MYOM2P54296 1465 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 SMARCA1P28370 1054 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 LRRC36Q1X8D7 754 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 LRRC8EQ6NSJ5 796 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 METTL13Q8N6R0 699 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 FLCNQ8NFG4 579 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 EAF2Q96CJ1 260 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 RBM41Q96IZ5 413 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 BLOC1S6Q9UL45 172 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 PDE5AO76074 875 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 ENO1P06733 434 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 CYB5D1Q6P9G0 228 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 CCDC134Q9H6E4 229 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 SLC38A10Q9HBR0 1119 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 MAGEA13PA6NCF6 341 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 MAPRE2Q15555 327 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 DDHD1Q8NEL9 900 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 PARVGQ9HBI0 331 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms