RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 KLC4Q9NSK0 619 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 CHD2O14647 1828 aaKnown RBP20.42■□□□□ 0.86
CSPG5-202ENST00000383738 A6NNZ2 444 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 STK4Q13043 487 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 TUBB8Q3ZCM7 444 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 PADI6Q6TGC4 694 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 ELAC2Q9BQ52 826 aaKnown RBP20.42■□□□□ 0.86
CSPG5-202ENST00000383738 YIPF3Q9GZM5 350 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 TPX2Q9ULW0 747 aaKnown RBP20.42■□□□□ 0.86
CSPG5-202ENST00000383738 CYTH3O43739 400 aa20.41■□□□□ 0.86
CSPG5-202ENST00000383738 GFPT1Q06210 699 aaPredicted RBP20.41■□□□□ 0.86
CSPG5-202ENST00000383738 NKX2-3Q8TAU0 364 aa20.41■□□□□ 0.86
CSPG5-202ENST00000383738 ARHGEF2Q92974 986 aaKnown RBP20.41■□□□□ 0.86
CSPG5-202ENST00000383738 A0A1B0GTH6 734 aa20.41■□□□□ 0.86
CSPG5-202ENST00000383738 NMT1P30419 496 aaKnown RBP20.41■□□□□ 0.86
CSPG5-202ENST00000383738 CAP2P40123 477 aa20.41■□□□□ 0.86
CSPG5-202ENST00000383738 PLTPP55058 493 aa20.41■□□□□ 0.86
CSPG5-202ENST00000383738 ERVK-24P63145 666 aa20.41■□□□□ 0.86
CSPG5-202ENST00000383738 TFAMQ00059 246 aaKnown RBP20.41■□□□□ 0.86
CSPG5-202ENST00000383738 FAM133AQ8N9E0 248 aa20.41■□□□□ 0.86
CSPG5-202ENST00000383738 EIF2AK1Q9BQI3 630 aaKnown RBP20.41■□□□□ 0.86
CSPG5-202ENST00000383738 HAUS2Q9NVX0 235 aa20.41■□□□□ 0.86
CSPG5-202ENST00000383738 PSD3Q9NYI0 1048 aa20.41■□□□□ 0.86
CSPG5-202ENST00000383738 NFX1Q12986 1120 aaKnown RBP20.41■□□□□ 0.86
CSPG5-202ENST00000383738 DHTKD1Q96HY7 919 aaPredicted RBP20.41■□□□□ 0.86
CSPG5-202ENST00000383738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.41■□□□□ 0.86
CSPG5-202ENST00000383738 ENO4A6NNW6 628 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 LMNB1P20700 586 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 CALCOCO2Q13137 446 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 MKRN4PQ13434 485 aaPredicted RBP20.4■□□□□ 0.86
CSPG5-202ENST00000383738 CCNI2Q6ZMN8 369 aaPredicted RBP20.4■□□□□ 0.86
CSPG5-202ENST00000383738 GSTA5Q7RTV2 222 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 ZBTB8OSQ8IWT0 167 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 XRN1Q8IZH2 1706 aaKnown RBP20.4■□□□□ 0.86
CSPG5-202ENST00000383738 NXF1Q9UBU9 619 aaKnown RBP20.4■□□□□ 0.86
CSPG5-202ENST00000383738 MTRF1LQ9UGC7 380 aaKnown RBP20.4■□□□□ 0.86
CSPG5-202ENST00000383738 ZNF394Q53GI3 561 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 CUEDC2Q9H467 287 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 CD44P16070 742 aaKnown RBP20.4■□□□□ 0.86
CSPG5-202ENST00000383738 RPS6P62753 249 aaKnown RBP20.4■□□□□ 0.86
CSPG5-202ENST00000383738 MXRA7P84157 204 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 BIRC2Q13490 618 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 STXBP2Q15833 593 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 AGBL3Q8NEM8 1001 aa20.4■□□□□ 0.86
CSPG5-202ENST00000383738 EIF3HO15372 352 aaKnown RBP eCLIP20.39■□□□□ 0.86
CSPG5-202ENST00000383738 ZNF131P52739 623 aa20.39■□□□□ 0.86
CSPG5-202ENST00000383738 DENND2CQ68D51 928 aa20.39■□□□□ 0.86
CSPG5-202ENST00000383738 GOLPH3Q9H4A6 298 aa20.39■□□□□ 0.86
CSPG5-202ENST00000383738 PTPN22Q9Y2R2 807 aa20.39■□□□□ 0.86
CSPG5-202ENST00000383738 MEFVO15553 781 aaPredicted RBP20.39■□□□□ 0.85
CSPG5-202ENST00000383738 IFRD2Q12894 506 aaPredicted RBP20.39■□□□□ 0.85
CSPG5-202ENST00000383738 CDAN1Q8IWY9 1227 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 ZMYND12Q9H0C1 365 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 RASAL2Q9UJF2 1139 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 MRC1P22897 1456 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 NPEPPSP55786 919 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 ZBED6P86452 979 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 COASYQ13057 564 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 CCDC105Q8IYK2 499 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 ZNF579Q8NAF0 562 aaKnown RBP20.39■□□□□ 0.85
CSPG5-202ENST00000383738 HDAC7Q8WUI4 952 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 LACRTQ9GZZ8 138 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 NDST4Q9H3R1 872 aa20.39■□□□□ 0.85
CSPG5-202ENST00000383738 GFPT2O94808 682 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 MYBL1P10243 752 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 SCP2P22307 547 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 CARSP49589 748 aaKnown RBP20.38■□□□□ 0.85
CSPG5-202ENST00000383738 DLK2Q6UY11 383 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 NLRP14Q86W24 1093 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 TAB3Q8N5C8 712 aaPredicted RBP20.38■□□□□ 0.85
CSPG5-202ENST00000383738 OSBPL9Q96SU4 736 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 INTS9Q9NV88 658 aaKnown RBP20.38■□□□□ 0.85
CSPG5-202ENST00000383738 FAM198AQ9UFP1 575 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 RWDD2AQ9UIY3 292 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 ADM5C9JUS6 153 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 H0Y3Z8 333 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 ERFP50548 548 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 MOB2Q70IA6 237 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 LMBR1Q8WVP7 490 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 RAD54LQ92698 747 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 TAAR1Q96RJ0 339 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 CCT8L2Q96SF2 557 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 DDX47Q9H0S4 455 aaKnown RBP20.38■□□□□ 0.85
CSPG5-202ENST00000383738 K7ERI5 159 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 PLEKP08567 350 aaPredicted RBP20.38■□□□□ 0.85
CSPG5-202ENST00000383738 BCRP11274 1271 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 PRELPP51888 382 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 MAGOHP61326 146 aaKnown RBP20.38■□□□□ 0.85
CSPG5-202ENST00000383738 PLA2G4FQ68DD2 849 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 DDX42Q86XP3 938 aaKnown RBP eCLIP20.38■□□□□ 0.85
CSPG5-202ENST00000383738 MAGOHBQ96A72 148 aaKnown RBP20.38■□□□□ 0.85
CSPG5-202ENST00000383738 SPDL1Q96EA4 605 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 SAAL1Q96ER3 474 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 ASIC3Q9UHC3 531 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 ANKRD26Q9UPS8 1709 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 NFIBO00712 420 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 CD58P19256 250 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 SETDB1Q15047 1291 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 AP1ARQ63HQ0 302 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 LMBRD2Q68DH5 695 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms