RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ITGAVP06756 1048 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 THBDP07204 575 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 PFKLP17858 780 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 SYT1P21579 422 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 PIP4K2AP48426 406 aaPredicted RBP4.39□□□□□ -1.71
SMC6-202ENST00000381272 NCKAP1LP55160 1127 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 PRR5P85299 388 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 G3BP1Q13283 466 aaKnown RBP eCLIP4.39□□□□□ -1.71
SMC6-202ENST00000381272 AMOTQ4VCS5 1084 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 CNKSR3Q6P9H4 555 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 EEPD1Q7L9B9 569 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 ARHGEF25Q86VW2 580 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 NECAB1Q8N987 351 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 KLHDC4Q8TBB5 520 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 MICAL1Q8TDZ2 1067 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 RUFY2Q8WXA3 655 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 KAZALD1Q96I82 304 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 PDLIM2Q96JY6 352 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 FAM227BQ96M60 508 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 LGR4Q9BXB1 951 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 EPN3Q9H201 632 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 BICC1Q9H694 974 aaKnown RBP4.39□□□□□ -1.71
SMC6-202ENST00000381272 PDRG1Q9NUG6 133 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 HYPKQ9NX55 129 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.39□□□□□ -1.71
SMC6-202ENST00000381272 CRYBG1Q9Y4K1 1723 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 IRS2Q9Y4H2 1338 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 SIPA1L3O60292 1781 aaPredicted RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 ZC3H12DA2A288 527 aaKnown RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 GRM8O00222 908 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 FIBPO43427 364 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 EPB41L2O43491 1005 aaKnown RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 BUB1BO60566 1050 aaPredicted RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 PPP1R11O60927 126 aaPredicted RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 OFD1O75665 1012 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 GJB6O95452 261 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 GJB2P29033 226 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 HOXC12P31275 282 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 KCNJ4P48050 445 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 ZC3H6P61129 1189 aaKnown RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 MTX1Q13505 466 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 MRM1Q6IN84 353 aaKnown RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 IQCEQ6IPM2 695 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 KRT28Q7Z3Y7 464 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 ZNF227Q86WZ6 799 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 FAM129CQ86XR2 697 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 NETO2Q8NC67 525 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 BTN2A2Q8WVV5 523 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 SYAP1Q96A49 352 aaPredicted RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 EAF2Q96CJ1 260 aaPredicted RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 EVI5LQ96CN4 794 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 PEX11GQ96HA9 241 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 GPATCH3Q96I76 525 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 CCDC140Q96MF4 163 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 MYD88Q99836 296 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 MTA3Q9BTC8 594 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 CHMP4AQ9BY43 222 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 BOLA2Q9H3K6 86 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 NUDT5Q9UKK9 219 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 NOL7Q9UMY1 257 aaKnown RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 RBM8AQ9Y5S9 174 aaKnown RBP4.38□□□□□ -1.71
SMC6-202ENST00000381272 HCFC2Q9Y5Z7 792 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 C5P01031 1676 aa4.38□□□□□ -1.71
SMC6-202ENST00000381272 VPS37CA5D8V6 355 aaPredicted RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 AGRPO00253 132 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 SLC27A2O14975 620 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 TBX1O43435 398 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 IGKV5-2P06315 115 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 PTMAP06454 111 aaKnown RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 AFF3P51826 1226 aaKnown RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 ST3GAL1Q11201 340 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 SLC9A5Q14940 896 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 NECTIN1Q15223 517 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 ME3Q16798 604 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 HS1BP3Q53T59 392 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 EPHA10Q5JZY3 1008 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 CREB3L3Q68CJ9 461 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 WWC2Q6AWC2 1192 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 ANKS3Q6ZW76 656 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 ERC1Q8IUD2 1116 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 TMEFF1Q8IYR6 380 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 LINS1Q8NG48 757 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 FRS2Q8WU20 508 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 HNRNPLLQ8WVV9 542 aaKnown RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 DDX17Q92841 729 aaKnown RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 DACT3Q96B18 629 aaPredicted RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 EDC3Q96F86 508 aaKnown RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 TCEANC2Q96MN5 208 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 ZNF830Q96NB3 372 aaPredicted RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 FSD1Q9BTV5 496 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 EPB41L4AQ9HCS5 686 aaPredicted RBP4.37□□□□□ -1.71
SMC6-202ENST00000381272 DDX21Q9NR30 783 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMC6-202ENST00000381272 FBLN5Q9UBX5 448 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 TPCN1Q9ULQ1 816 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 MTMR6Q9Y217 621 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 CYP46A1Q9Y6A2 500 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 HEG1Q9ULI3 1381 aa4.37□□□□□ -1.71
SMC6-202ENST00000381272 CCDC171Q6TFL3 1326 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms