RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 CTSWP56202 376 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 POLR2FP61218 127 aaKnown RBP11.52□□□□□ -0.57
CLCN4-202ENST00000380833 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-202ENST00000380833 ZNF473Q8WTR7 871 aaKnown RBP11.52□□□□□ -0.57
CLCN4-202ENST00000380833 ZNF277Q9NRM2 450 aaPredicted RBP11.52□□□□□ -0.57
CLCN4-202ENST00000380833 FLT4P35916 1363 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 LRRN2O75325 713 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 FAPQ12884 760 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 ACCSLQ4AC99 568 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 FAM160B1Q5W0V3 765 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 KRT40Q6A162 431 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 BTNL9Q6UXG8 535 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 FAM196AQ6ZSG2 479 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 KRT27Q7Z3Y8 459 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 SLAIN2Q9P270 581 aa11.52□□□□□ -0.57
CLCN4-202ENST00000380833 KRT20P35900 424 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 ABL2P42684 1182 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 POSTNQ15063 836 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 TBCCQ15814 346 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 CROCCP3Q8IVE0 287 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 SEL1LQ9UBV2 794 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 AMFRQ9UKV5 643 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 ERBB3P21860 1342 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 ATG16L1Q676U5 607 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 CDC37L1Q7L3B6 337 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 DNAAF3Q8N9W5 541 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 B3GALT6Q96L58 329 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 MRPL11Q9Y3B7 192 aaKnown RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 DNALI1O14645 258 aaPredicted RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 C21orf2O43822 256 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 ZNF202O95125 648 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 XRCC5P13010 732 aaKnown RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 LRRC41Q15345 812 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 SPATA1Q5VX52 437 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 TDRD7Q8NHU6 1098 aaKnown RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 DDI1Q8WTU0 396 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 CAAP1Q9H8G2 361 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 KPNA4O00629 521 aaPredicted RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 AKR1D1P51857 326 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 SCRN3Q0VDG4 424 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 TRIP13Q15645 432 aaPredicted RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 ZCWPW2Q504Y3 356 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 ABHD8Q96I13 439 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 PITPNM3Q9BZ71 974 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 TRPV6Q9H1D0 765 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 DPYSL4O14531 572 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 C2orf54Q08AI8 447 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 ART3Q13508 389 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 CTTNQ14247 550 aaKnown RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 PRPSAP1Q14558 356 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 HADHQ16836 314 aaKnown RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 ANKRD13CQ8N6S4 541 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 TERB1Q8NA31 727 aa11.51□□□□□ -0.57
CLCN4-202ENST00000380833 AFF4Q9UHB7 1163 aaKnown RBP11.51□□□□□ -0.57
CLCN4-202ENST00000380833 ANXA13P27216 316 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 HDLBPQ00341 1268 aaKnown RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 GCKRQ14397 625 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 CDR2LQ86X02 465 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 CCT7Q99832 543 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 ZNF577Q9BSK1 485 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 MAP10Q9P2G4 905 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 NFE2L3Q9Y4A8 694 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 PRR23D1E9PI22 279 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 PRR23D2P0DMB1 279 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 YWHAEP62258 255 aaKnown RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 DYNLL1P63167 89 aaKnown RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 LRRC8BQ6P9F7 803 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 ZNF554Q86TJ5 538 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 SGSM3Q96HU1 749 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 LRRC37BQ96QE4 947 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 NRBP2Q9NSY0 501 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 ANP32DO95626 131 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 HOXA13P31271 388 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 VHLP40337 213 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 CHRNDQ07001 517 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 MESDQ14696 234 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 CYTH1Q15438 398 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 TSC22D1Q15714 1073 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 ADRM1Q16186 407 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 THOC7Q6I9Y2 204 aaKnown RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 DSTYKQ6XUX3 929 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 PLEKHM2Q8IWE5 1019 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 AGGF1Q8N302 714 aaeCLIP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 MARCH10Q8NA82 808 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 C3orf20Q8ND61 904 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 SKA1Q96BD8 255 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 TMEM87BQ96K49 555 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 USP19O94966 1318 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 ARPC4-TTLL3A0A0A6YYG9 625 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 GOLGA8JA6NMD2 632 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 AP3B1O00203 1094 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 RASSF9O75901 435 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 SSTR3P32745 418 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-202ENST00000380833 LRRC24Q50LG9 513 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 SCN4BQ8IWT1 228 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 CLIC6Q96NY7 704 aa11.5□□□□□ -0.57
CLCN4-202ENST00000380833 SAMSN1Q9NSI8 373 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms