RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CACNA2D4Q7Z3S7 1137 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 CHST13Q8NET6 341 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 SLC35C1Q96A29 364 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 CDHR1Q96JP9 859 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 LSM14BQ9BX40 385 aaKnown RBP21.12■□□□□ 0.97
GMDS-201ENST00000380805 POLD4Q9HCU8 107 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 LARSQ9P2J5 1176 aaKnown RBP21.12■□□□□ 0.97
GMDS-201ENST00000380805 TESPA1A2RU30 521 aaPredicted RBP21.12■□□□□ 0.97
GMDS-201ENST00000380805 CTAGE9A4FU28 777 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 ZNF263O14978 683 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 KRT86O43790 486 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 RGS20O76081 388 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 KCNA2P16389 499 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 SMAP1Q8IYB5 467 aaPredicted RBP21.12■□□□□ 0.97
GMDS-201ENST00000380805 NAPGQ99747 312 aaPredicted RBP21.12■□□□□ 0.97
GMDS-201ENST00000380805 CARD6Q9BX69 1037 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 MOV10L1Q9BXT6 1211 aaKnown RBP21.12■□□□□ 0.97
GMDS-201ENST00000380805 GBP3Q9H0R5 595 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 SAMM50Q9Y512 469 aa21.12■□□□□ 0.97
GMDS-201ENST00000380805 RBAK-RBAKDNI3L0D1 243 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 PSMC2P35998 433 aaKnown RBP21.11■□□□□ 0.97
GMDS-201ENST00000380805 CASP4P49662 377 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 KIF11P52732 1056 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 ELF2Q15723 593 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 UGCGQ16739 394 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 LBX2Q6XYB7 198 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 HS2ST1Q7LGA3 356 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 PDCL2Q8N4E4 241 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 MNS1Q8NEH6 495 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 JAKMIP2Q96AA8 810 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 TSGA10Q9BZW7 698 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 AGPAT3Q9NRZ7 376 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 AIPL1Q9NZN9 384 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 TCEAL9Q9UHQ7 104 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 CDC23Q9UJX2 597 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 MYO6Q9UM54 1294 aa21.11■□□□□ 0.97
GMDS-201ENST00000380805 DOCK5Q9H7D0 1870 aa21.1■□□□□ 0.97
GMDS-201ENST00000380805 LRRC37A2A6NM11 1700 aa21.1■□□□□ 0.97
GMDS-201ENST00000380805 PLEKP08567 350 aaPredicted RBP21.1■□□□□ 0.97
GMDS-201ENST00000380805 PLS3P13797 630 aa21.1■□□□□ 0.97
GMDS-201ENST00000380805 CCDC122Q5T0U0 273 aa21.1■□□□□ 0.97
GMDS-201ENST00000380805 SULF1Q8IWU6 871 aa21.1■□□□□ 0.97
GMDS-201ENST00000380805 C12orf56Q8IXR9 622 aa21.1■□□□□ 0.97
GMDS-201ENST00000380805 IWS1Q96ST2 819 aa21.1■□□□□ 0.97
GMDS-201ENST00000380805 CLIC2O15247 247 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 PPP1R12BO60237 982 aaPredicted RBP21.09■□□□□ 0.97
GMDS-201ENST00000380805 TLR2O60603 784 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 EIF4A3P38919 411 aaKnown RBP21.09■□□□□ 0.97
GMDS-201ENST00000380805 AMPD2Q01433 879 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 SPA17Q15506 151 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 KIAA1328Q86T90 577 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 SLC17A8Q8NDX2 589 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 DNERQ8NFT8 737 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 DRC1Q96MC2 740 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 TMEM206Q9H813 350 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 TRIM10Q9UDY6 481 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 PCDHA10Q9Y5I2 948 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 CSADQ9Y600 493 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 RCCD1A6NED2 376 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 SERPING1P05155 500 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 POLR2FP61218 127 aaKnown RBP21.09■□□□□ 0.97
GMDS-201ENST00000380805 SNRPFP62306 86 aaKnown RBP21.09■□□□□ 0.97
GMDS-201ENST00000380805 HSP90AA2PQ14568 343 aaPredicted RBP21.09■□□□□ 0.97
GMDS-201ENST00000380805 PPP2R5AQ15172 486 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 ERCC6LQ2NKX8 1250 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 SFMBT2Q5VUG0 894 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 RSRC2Q7L4I2 434 aaKnown RBP21.09■□□□□ 0.97
GMDS-201ENST00000380805 FAM186BQ8IYM0 893 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 PROCA1Q8NCQ7 364 aaPredicted RBP21.09■□□□□ 0.97
GMDS-201ENST00000380805 LACRTQ9GZZ8 138 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.09■□□□□ 0.97
GMDS-201ENST00000380805 GUCA1BQ9UMX6 200 aa21.09■□□□□ 0.97
GMDS-201ENST00000380805 V9GYY5 206 aaPredicted RBP21.09■□□□□ 0.97
GMDS-201ENST00000380805 SPATA31C2B4DYI2 1134 aa21.08■□□□□ 0.97
GMDS-201ENST00000380805 PJA2O43164 708 aa21.08■□□□□ 0.97
GMDS-201ENST00000380805 DKC1O60832 514 aaKnown RBP eCLIP21.08■□□□□ 0.979e-7■■■■■ 52.5
GMDS-201ENST00000380805 PON1P27169 355 aa21.08■□□□□ 0.97
GMDS-201ENST00000380805 PPATQ06203 517 aa21.08■□□□□ 0.97
GMDS-201ENST00000380805 EXOC3L4Q17RC7 722 aa21.08■□□□□ 0.97
GMDS-201ENST00000380805 SLC9C1Q4G0N8 1177 aa21.08■□□□□ 0.97
GMDS-201ENST00000380805 CHADLQ6NUI6 762 aa21.08■□□□□ 0.97
GMDS-201ENST00000380805 CRACR2AQ9BSW2 395 aa21.08■□□□□ 0.97
GMDS-201ENST00000380805 PFASO15067 1338 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 A0A0G2JLL6 359 aaPredicted RBP21.07■□□□□ 0.96
GMDS-201ENST00000380805 BACH1O14867 736 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 STBD1O95210 358 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 H2AFXP16104 143 aaPredicted RBP21.07■□□□□ 0.96
GMDS-201ENST00000380805 ICAM3P32942 547 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 IREB2P48200 963 aaKnown RBP21.07■□□□□ 0.96
GMDS-201ENST00000380805 NCKAP1LP55160 1127 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 MCCD1P59942 119 aaPredicted RBP21.07■□□□□ 0.96
GMDS-201ENST00000380805 GTF2BQ00403 316 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 GNPTABQ3T906 1256 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 TREML2Q5T2D2 321 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 KLHDC7AQ5VTJ3 777 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 PRRT2Q7Z6L0 340 aaPredicted RBP21.07■□□□□ 0.96
GMDS-201ENST00000380805 RIOX2Q8IUF8 465 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 UBXN4Q92575 508 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 NLRC4Q9NPP4 1024 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 FBXO40Q9UH90 709 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms