RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 CCDC196A0A1B0GTZ2 297 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 FDPSP14324 419 aaKnown RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 IFNAR1P17181 557 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 PSMA5P28066 241 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 NT5C2P49902 561 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 ERVK-21P61565 698 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 PRKCEQ02156 737 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 IER5Q5VY09 327 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 TAF2Q6P1X5 1199 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 RHPN2Q8IUC4 686 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 FIBCD1Q8N539 461 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 GIMAP8Q8ND71 665 aaPredicted RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 ATXN2LQ8WWM7 1075 aaKnown RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 TMEM143Q96AN5 459 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 GBP3Q9H0R5 595 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 TYW1Q9NV66 732 aaKnown RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 BARX2Q9UMQ3 279 aaPredicted RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 PCDHA10Q9Y5I2 948 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 PTPRZ1P23471 2315 aaPredicted RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 TBKBP1A7MCY6 615 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 BTBD18B2RXH4 712 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 M0QZ92 97 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 DGKIO75912 1065 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 C22orf31O95567 290 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 SRGAP2CP0DJJ0 459 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 COL9A1P20849 921 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 GNA11P29992 359 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 CDR1P51861 262 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 HTRA4P83105 476 aaPredicted RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 RBL2Q08999 1139 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 CTTNQ14247 550 aaKnown RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 LLGL2Q6P1M3 1020 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 TSHZ1Q6ZSZ6 1077 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 FAM228AQ86W67 206 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 TMEM173Q86WV6 379 aaPredicted RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 TRIM22Q8IYM9 498 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 BLIDQ8IZY5 108 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 ATP8B4Q8TF62 1192 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 NLRP7Q8WX94 980 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 KCNB2Q92953 911 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 MTA3Q9BTC8 594 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 AGXT2Q9BYV1 514 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 UBE2ZQ9H832 354 aaPredicted RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 INPP5FQ9Y2H2 1132 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 SIP14410 1827 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 IGSF9BQ9UPX0 1349 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 COL4A6Q14031 1691 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 A0A087WZ62 844 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 FOSP01100 380 aaPredicted RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 ITGB1P05556 798 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 LTBRP36941 435 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 ERVFC1P60507 584 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 TBC1D8BQ0IIM8 1120 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 ST3GAL1Q11201 340 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 MIS18BP1Q6P0N0 1132 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 RSPH3Q86UC2 560 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 FDXACB1Q9BRP7 624 aaPredicted RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 RNF26Q9BY78 433 aaPredicted RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 SEZ6LQ9BYH1 1024 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 DDX25Q9UHL0 483 aaKnown RBP5.27□□□□□ -1.57
C9orf72-203ENST00000380003 HES2Q9Y543 173 aa5.27□□□□□ -1.57
C9orf72-203ENST00000380003 TTC3P53804 2025 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 DDX11L8A8MPP1 907 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 F8W810 466 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 MAFGO15525 162 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 TBX10O75333 385 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 GPR32O75388 356 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 ATG7O95352 703 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 SSBP05455 408 aaKnown RBP eCLIP5.26□□□□□ -1.57
C9orf72-203ENST00000380003 NRIP1P48552 1158 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 AP3B2Q13367 1082 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 PTCRAQ6ISU1 281 aaPredicted RBP5.26□□□□□ -1.57
C9orf72-203ENST00000380003 XRRA1Q6P2D8 792 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 LRRC55Q6ZSA7 311 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 ANO5Q75V66 913 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 PIGOQ8TEQ8 1089 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 POF1BQ8WVV4 589 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 SCUBE2Q9NQ36 999 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 PPP4R2Q9NY27 417 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 ORC3Q9UBD5 711 aaPredicted RBP5.26□□□□□ -1.57
C9orf72-203ENST00000380003 LRFN2Q9ULH4 789 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 PCDHA4Q9UN74 947 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 PLAGL2Q9UPG8 496 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 PCDHA2Q9Y5H9 948 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 MAFBQ9Y5Q3 323 aaPredicted RBP5.26□□□□□ -1.57
C9orf72-203ENST00000380003 TRPV2Q9Y5S1 764 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 ADGRA3Q8IWK6 1321 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 PIEZO1Q92508 2521 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 IGKV6D-21A0A0A0MT36 114 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 HIDE1A8MVS5 230 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 H3BNC9 293 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 MARCH6O60337 910 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 HBP1O60381 514 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 LIG1P18858 919 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 CDC25AP30304 524 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 BMPR1AP36894 532 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 NCAPH2Q6IBW4 605 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 PLPPR4Q7Z2D5 763 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 MIER3Q7Z3K6 550 aa5.26□□□□□ -1.57
C9orf72-203ENST00000380003 CCDC83Q8IWF9 413 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms