RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SAMD15Q9P1V8 674 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 CTTNBP2NLQ9P2B4 639 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 ITGB1BP2Q9UKP3 347 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 PNMA3Q9UL41 463 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF330Q9Y3S2 320 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 STK24Q9Y6E0 443 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 UBR3Q6ZT12 1888 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 KIF28PB7ZC32 967 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 MAGEB3O15480 346 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 RAD21O60216 631 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 FGRP09769 529 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 HSPA1LP34931 641 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 PLCD1P51178 756 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 RNASELQ05823 741 aaKnown RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 SYDE2Q5VT97 1194 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 CDKAL1Q5VV42 579 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 FBXO33Q7Z6M2 555 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 DAAM2Q86T65 1068 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 CYP4X1Q8N118 509 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 ENDOVQ8N8Q3 282 aaKnown RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 IFT74Q96LB3 600 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 SIKE1Q9BRV8 207 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 TAOK3Q9H2K8 898 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 NMRK1Q9NWW6 199 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 DACH1Q9UI36 760 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 SUGT1Q9Y2Z0 365 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 MYO5AQ9Y4I1 1855 aaKnown RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 QSER1Q2KHR3 1735 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 MACROD2A1Z1Q3 448 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 MAGEA13PA6NCF6 341 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 ATP9AO75110 1047 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 PDIA3P30101 505 aaKnown RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 ADORA1P30542 326 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 CXCR5P32302 372 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 GEMIN4P57678 1058 aaKnown RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 CHRNDQ07001 517 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF394Q53GI3 561 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 NT5DC1Q5TFE4 455 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 RESP18Q5W5W9 173 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 NFRKBQ6P4R8 1299 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 LINC00116Q8NCU8 138 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 FERMT2Q96AC1 680 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 PSMB7Q99436 277 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 OSBPL10Q9BXB5 764 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 C10orf71Q711Q0 1435 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 TACC1O75410 805 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 TRIM21P19474 475 aaKnown RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 CYP4A11Q02928 519 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 TTLL12Q14166 644 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 SBK1Q52WX2 424 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 CFAP157Q5JU67 520 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 RAB11FIP4Q86YS3 637 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 PIGOQ8TEQ8 1089 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 CATSPER2Q96P56 530 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 SMC6Q96SB8 1091 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 LRRC4CQ9HCJ2 640 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 NRXN2Q9P2S2 1712 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF532Q9HCE3 1301 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 NVLO15381 856 aaKnown RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 LDHCP07864 332 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 MYCLP1P12525 358 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 CCT6AP40227 531 aaKnown RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 PDE6CP51160 858 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 RPS8P62241 208 aaKnown RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 RCN1Q15293 331 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 FAM98CQ17RN3 349 aaKnown RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 SH3D19Q5HYK7 790 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 ATXN2LQ8WWM7 1075 aaKnown RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 CTAGE1Q96RT6 745 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 DDX23Q9BUQ8 820 aaKnown RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 NAPBQ9H115 298 aa8.09□□□□□ -1.11
CDKL5-201ENST00000379989 RABL2AQ9UBK7 228 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 CCNL1Q9UK58 526 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-201ENST00000379989 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 H0Y3Z8 333 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 OAS1P00973 400 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 PRLRP16471 622 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 ERCC5P28715 1186 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 CTNNA1P35221 906 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 USP11P51784 963 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 STX17P56962 302 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 CAMK2BQ13554 666 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 TRAPPC3LQ5T215 181 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 SPATA1Q5VX52 437 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 DZIP1Q86YF9 867 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 MAP7D3Q8IWC1 876 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 CXorf38Q8TB03 319 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 NUDCD1Q96RS6 583 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 TCHPQ9BT92 498 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 CNOT10Q9H9A5 744 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 ZNF287Q9HBT7 754 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 SEC31BQ9NQW1 1179 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 CAPN6Q9Y6Q1 641 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 TNRC6CQ9HCJ0 1690 aaKnown RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 NUTM2BA6NNL0 878 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 NUTM2EB1AL46 878 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-201ENST00000379989 BMP15O95972 392 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 CHGBP05060 677 aa8.08□□□□□ -1.12
CDKL5-201ENST00000379989 GSTT2P0CG29 244 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms