RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SNAP25P60880 206 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 GIT2Q14161 759 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 E2F5Q15329 346 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 RPS6KA1Q15418 735 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 PTPROQ16827 1216 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 DOK7Q18PE1 504 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 ZNF571Q7Z3V5 609 aaPredicted RBP18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 CPLX4Q7Z7G2 160 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 ZC3H3Q8IXZ2 948 aaKnown RBP18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 MAGEC3Q8TD91 643 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 SPAG5Q96R06 1193 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 P2RX7Q99572 595 aaKnown RBP18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 COA1Q9GZY4 146 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 CNOT8Q9UFF9 292 aaKnown RBP18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 MYH4Q9Y623 1939 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 HLA-DOAP06340 250 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 ADRA2BP18089 450 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 GKAP1Q5VSY0 366 aaPredicted RBP18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 PROCA1Q8NCQ7 364 aaPredicted RBP18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 ARMCX3Q9UH62 379 aaPredicted RBP18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 PITPNM2Q9BZ72 1349 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 MEIS2O14770 477 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 UCHL3P15374 230 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 ARMC9Q7Z3E5 817 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 SLFN12Q8IYM2 578 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 ZC3H12CQ9C0D7 883 aaKnown RBP18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 FBXL5Q9UKA1 691 aa18.07■□□□□ 0.48
PCDHA1-201ENST00000378133 CYP3A7-CYP3A51PA0A087WV96 503 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 C5orf60A6NFR6 353 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 EEF2P13639 858 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 CYP3A7P24462 503 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 HOXD13P35453 343 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 ARHGAP4P98171 946 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 SPIRE1Q08AE8 756 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 BYSLQ13895 437 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 PPP2R5AQ15172 486 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 KNOP1Q1ED39 458 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 LACTB2Q53H82 288 aaPredicted RBP18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 DPY19L2P1Q6NXN4 242 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 SFR1Q86XK3 245 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 CRAMP1Q96RY5 1269 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 REEP2Q9BRK0 252 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 BCAS3Q9H6U6 928 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 PHF20L1A8MW92 1017 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 PLSCR1O15162 318 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 CEP104O60308 925 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 SLC8A1P32418 973 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 IFFO1Q0D2I5 559 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 XRCC4Q13426 336 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 DCAF17Q5H9S7 520 aaPredicted RBP18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 AGBL2Q5U5Z8 902 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 APOBEC3HQ6NTF7 200 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 NEUROG2Q9H2A3 272 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 DNM3Q9UQ16 869 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 SUGT1Q9Y2Z0 365 aa18.06■□□□□ 0.48
PCDHA1-201ENST00000378133 MYO3BQ8WXR4 1341 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 PPEF1O14829 653 aaPredicted RBP18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 AFPP02771 609 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 SPATA31C1P0DKV0 1188 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 PON1P27169 355 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 CACNB3P54284 484 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 MAGOHP61326 146 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 TCP10Q12799 353 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 EXOC3L4Q17RC7 722 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 ETNPPLQ8TBG4 499 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 SCFD2Q8WU76 684 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 TATDN2Q93075 761 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 MAGOHBQ96A72 148 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 HVCN1Q96D96 273 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 AP1M1Q9BXS5 423 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 GLT8D2Q9H1C3 349 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 DNAJC18Q9H819 358 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 TRAF3IP3Q9Y228 551 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 SART1O43290 800 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 AKAP3O75969 853 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 MAP2K1Q02750 393 aaPredicted RBP18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 MTMR3Q13615 1198 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 TCERG1LQ5VWI1 586 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 SLFN13Q68D06 897 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 FRMD5Q7Z6J6 570 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 SP8Q8IXZ3 490 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 RBM46Q8TBY0 533 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 MBOAT7Q96N66 472 aa18.05■□□□□ 0.48
PCDHA1-201ENST00000378133 RSPH10B2B2RC85 870 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 CES2O00748 559 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 OPLAHO14841 1288 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 PAEPP09466 180 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 RSPH10BP0C881 870 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 XRCC5P13010 732 aaKnown RBP18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 FLT3P36888 993 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 CYP4A11Q02928 519 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 LRCH2Q5VUJ6 765 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 SYT2Q8N9I0 419 aaPredicted RBP18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 CCT6BQ92526 530 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 NAGPAQ9UK23 515 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 DCDC2CA8MYV0 355 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 KCTD19Q17RG1 926 aaPredicted RBP18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 USH1GQ495M9 461 aa18.04■□□□□ 0.48
PCDHA1-201ENST00000378133 ALKBH5Q6P6C2 394 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms