RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 C12orf60Q5U649 245 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 NUGGCQ68CJ6 796 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 CEP63Q96MT8 703 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 ZDHHC18Q9NUE0 388 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 STXBP5LQ9Y2K9 1186 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 SNX3O60493 162 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 PON1P27169 355 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 C10orf76Q5T2E6 689 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 GLYCTKQ8IVS8 523 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 SLC17A8Q8NDX2 589 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 SLC35G2Q8TBE7 412 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
CKAP4-201ENST00000378026 CASP5P51878 434 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 KIAA1755Q5JYT7 1200 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 DUPD1Q68J44 220 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 ARHGAP27Q6ZUM4 889 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 VPS36Q86VN1 386 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 JAMLQ86YT9 394 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 CCHCR1Q8TD31 782 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 TXLNGYQ9BZA5 131 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 KCNK9Q9NPC2 374 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 ARMCX3Q9UH62 379 aaPredicted RBP17.19■□□□□ 0.34
CKAP4-201ENST00000378026 MINPP1Q9UNW1 487 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 ADAMTSL3P82987 1691 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 TMEM110-MUSTN1A8MSY1 372 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 BTNL10A8MVZ5 291 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
CKAP4-201ENST00000378026 GNA14O95837 355 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 PLCG2P16885 1265 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
CKAP4-201ENST00000378026 KLRC3Q07444 240 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 UBE4AQ14139 1066 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 SBK1Q52WX2 424 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 THEMIS2Q5TEJ8 643 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 BICDL1Q6ZP65 573 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 MAPKAPK5Q8IW41 473 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 SYCE1Q8N0S2 351 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 SPDYE1Q8NFV5 336 aaPredicted RBP17.19■□□□□ 0.34
CKAP4-201ENST00000378026 SH3RF3Q8TEJ3 882 aaPredicted RBP17.19■□□□□ 0.34
CKAP4-201ENST00000378026 SEC14L1Q92503 715 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 HES6Q96HZ4 224 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 PTPN22Q9Y2R2 807 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 ARAP2Q8WZ64 1704 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 LONRF1Q17RB8 773 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 MIS18BP1Q6P0N0 1132 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 CCDC65Q8IXS2 484 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 RNF217Q8TC41 542 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 PGM2Q96G03 612 aa17.19■□□□□ 0.34
CKAP4-201ENST00000378026 USP15Q9Y4E8 981 aaPredicted RBP17.19■□□□□ 0.34
CKAP4-201ENST00000378026 IGSF9BQ9UPX0 1349 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 NUP98P52948 1817 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 GOLGA6L10A0A0M3HER8 536 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 RASGRF2O14827 1237 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 PTENP60484 403 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 DIXDC1Q155Q3 683 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 CNGA2Q16280 664 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 ANKRD20A2Q5SQ80 823 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 ANKRD20A1Q5TYW2 823 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 ANKRD20A3Q5VUR7 823 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 KSR1Q8IVT5 923 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 CELF1Q92879 486 aaKnown RBP17.18■□□□□ 0.34
CKAP4-201ENST00000378026 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 LRRC27Q9C0I9 530 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 KCNMB3Q9NPA1 279 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 SLC5A4Q9NY91 659 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 CHORDC1Q9UHD1 332 aaPredicted RBP17.18■□□□□ 0.34
CKAP4-201ENST00000378026 COL4A1P02462 1669 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 RPTORQ8N122 1335 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 POTEB3A0JP26 581 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 POTECB2RU33 542 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 SMNDC1O75940 238 aaKnown RBP eCLIP17.18■□□□□ 0.34
CKAP4-201ENST00000378026 AFPP02771 609 aaKnown RBP17.18■□□□□ 0.34
CKAP4-201ENST00000378026 MSH2P43246 934 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 PDE6CP51160 858 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 COPS2P61201 443 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 POTEBQ6S5H4 581 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 ZDHHC24Q6UX98 284 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 BARGINQ6ZT62 677 aa17.18■□□□□ 0.34
CKAP4-201ENST00000378026 CLIC2O15247 247 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 EDIL3O43854 480 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 NUDT17P0C025 328 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 CCND1P24385 295 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 TAF11Q15544 211 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 C6orf118Q5T5N4 469 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 SLFN11Q7Z7L1 901 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 CCDC24Q8N4L8 307 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 KCTD10Q9H3F6 313 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 BZW2Q9Y6E2 419 aaKnown RBP17.17■□□□□ 0.34
CKAP4-201ENST00000378026 CCDC88AQ3V6T2 1871 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 USP17L5A8MUK1 530 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 NTSR2O95665 410 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 XRCC5P13010 732 aaKnown RBP17.17■□□□□ 0.34
CKAP4-201ENST00000378026 TMEM119Q4V9L6 283 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 CDCA2Q69YH5 1023 aaPredicted RBP17.17■□□□□ 0.34
CKAP4-201ENST00000378026 DNAJC17Q9NVM6 304 aaKnown RBP17.17■□□□□ 0.34
CKAP4-201ENST00000378026 KIF3CO14782 793 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 KIAA0391O15091 583 aaKnown RBP17.17■□□□□ 0.34
CKAP4-201ENST00000378026 AP1G2O75843 785 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 PLA2G4BP0C869 781 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 248.8 ms