RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 MYO9BQ13459 2157 aa12.99□□□□□ -0.33
SMARCE1-203ENST00000377808 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 DENND3A2RUS2 1198 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 DKC1O60832 514 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 P4HBP07237 508 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 MCM7P33993 719 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 TXKP42681 527 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 CRYBB1P53674 252 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 NLRP11P59045 1033 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 CYP4A11Q02928 519 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 ODR4Q5SWX8 454 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 B3GNT9Q6UX72 402 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 TMEM40Q8WWA1 233 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 LXNQ9BS40 222 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 C17orf80Q9BSJ5 609 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 LRFN2Q9ULH4 789 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 SQORQ9Y6N5 450 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 EVPLQ92817 2033 aa12.98□□□□□ -0.33
SMARCE1-203ENST00000377808 WNT7AO00755 349 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 GPR182O15218 404 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 DNM2P50570 870 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 HTRA4P83105 476 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 GRB10Q13322 594 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 CTTNQ14247 550 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 EPHA7Q15375 998 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 TPH2Q8IWU9 490 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 FIBCD1Q8N539 461 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 LINC01599Q8WXQ3 324 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 DYDC2Q96IM9 177 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 CEP170P1Q96L14 293 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 NIFKQ9BYG3 293 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 RGL1Q9NZL6 768 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 PCDHA12Q9UN75 941 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 ST3GAL5Q9UNP4 418 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 KIF3AQ9Y496 699 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 WDR81Q562E7 1941 aa12.97□□□□□ -0.33
SMARCE1-203ENST00000377808 LOXHD1Q8IVV2 1947 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 GPR32O75388 356 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 STAG3L1P0CL83 205 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 POLGP54098 1239 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 NPEPPSP55786 919 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 ERVK-21P61565 698 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 BTG3Q14201 252 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 ZNF174Q15697 407 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 PAN2Q504Q3 1202 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 ANO5Q75V66 913 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 FAM228AQ86W67 206 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 FBXO18Q8NFZ0 1043 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 TBC1D32Q96NH3 1257 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 TMX1Q9H3N1 280 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 TTC12Q9H892 705 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 ERVK-5Q9HDB9 667 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 PRDM6Q9NQX0 595 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 CYP26B1Q9NR63 512 aa12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 NOL7Q9UMY1 257 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-203ENST00000377808 COL4A4P53420 1690 aaPredicted RBP12.96□□□□□ -0.34
SMARCE1-203ENST00000377808 ADGRA3Q8IWK6 1321 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 SPTBN5Q9NRC6 3674 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 CSPG5O95196 566 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 STBD1O95210 358 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 CD2BP2O95400 341 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 FGFR4P22455 802 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 YWHABP31946 246 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 CTNNB1P35222 781 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 GPC3P51654 580 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 DRP2Q13474 957 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 TARBP2Q15633 366 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 TTC38Q5R3I4 469 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 MCTP1Q6DN14 999 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 RTN4RL1Q86UN2 441 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 RHPN2Q8IUC4 686 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 NPAS4Q8IUM7 802 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 LINC01465Q8N7H1 131 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 SP7Q8TDD2 431 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 SLC7A3Q8WY07 619 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 TMX3Q96JJ7 454 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 NLRP4Q96MN2 994 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 ADAM2Q99965 735 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 EIF2AK1Q9BQI3 630 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 JPH2Q9BR39 696 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 TMEM60Q9H2L4 133 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 SUCLA2Q9P2R7 463 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 WRAP73Q9P2S5 460 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 PCDHB7Q9Y5E2 793 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 MTCH2Q9Y6C9 303 aa12.95□□□□□ -0.34
SMARCE1-203ENST00000377808 CHD9Q3L8U1 2897 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 POTEMA6NI47 508 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 H3BQV1 296 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 MGEA5O60502 916 aa12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 ZSCAN20P17040 1043 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 EIF4BP23588 611 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-203ENST00000377808 GJB2P29033 226 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms