RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ALAS1P13196 640 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 SLC9A1P19634 815 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 MUTP22033 750 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 BANK1Q8NDB2 785 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 IL31RAQ8NI17 732 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 RIT2Q99578 217 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 KIAA1683Q9H0B3 1180 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 PARVGQ9HBI0 331 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 CAPN6Q9Y6Q1 641 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 NFKBIEO00221 500 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 TACC1O75410 805 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 XRCC5P13010 732 aaKnown RBP15.29■□□□□ 0.04
MSH5-202ENST00000375740 RASSF7Q02833 373 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 ARID5AQ03989 594 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 TNFAIP1Q13829 316 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 RAPGEF1Q13905 1077 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 DPY19L2P1Q6NXN4 242 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 SAMD7Q7Z3H4 446 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 KSR1Q8IVT5 923 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 ANKRD13CQ8N6S4 541 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 LPAR1Q92633 364 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 HPCAL4Q9UM19 191 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 RPTORQ8N122 1335 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 ZNF185O15231 689 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 PJA2O43164 708 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 GGCXP38435 758 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 MNAT1P51948 309 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 DCAF17Q5H9S7 520 aaPredicted RBP15.29■□□□□ 0.04
MSH5-202ENST00000375740 CCDC91Q7Z6B0 441 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 MCF2L2Q86YR7 1114 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 LXNQ9BS40 222 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 METTL14Q9HCE5 456 aaKnown RBP15.29■□□□□ 0.04
MSH5-202ENST00000375740 JADE2Q9NQC1 790 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 KCNH7Q9NS40 1196 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 HOMER2Q9NSB8 354 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 PPP1R1BQ9UD71 204 aaPredicted RBP15.29■□□□□ 0.04
MSH5-202ENST00000375740 SALL4Q9UJQ4 1053 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 PCDHB13Q9Y5F0 798 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 FER1L6Q2WGJ9 1857 aa15.29■□□□□ 0.04
MSH5-202ENST00000375740 EIF3DO15371 548 aaKnown RBP eCLIP15.28■□□□□ 0.04
MSH5-202ENST00000375740 CTNND1O60716 968 aaKnown RBP15.28■□□□□ 0.04
MSH5-202ENST00000375740 CEP89Q96ST8 783 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 AIPL1Q9NZN9 384 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 FAM169AQ9Y6X4 670 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 FRMPD4Q14CM0 1322 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 RBAK-RBAKDNI3L0D1 243 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 SLC16A3O15427 465 aaKnown RBP15.28■□□□□ 0.04
MSH5-202ENST00000375740 MYBL2P10244 700 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 EPB41P11171 864 aaKnown RBP15.28■□□□□ 0.04
MSH5-202ENST00000375740 BCRP11274 1271 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 ENOX2Q16206 610 aaKnown RBP15.28■□□□□ 0.04
MSH5-202ENST00000375740 TCERG1LQ5VWI1 586 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 TTC19Q6DKK2 380 aaPredicted RBP15.28■□□□□ 0.04
MSH5-202ENST00000375740 ZNF720Q7Z2F6 126 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 FAM133AQ8N9E0 248 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 FIZ1Q96SL8 496 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 SLC38A10Q9HBR0 1119 aa15.28■□□□□ 0.04
MSH5-202ENST00000375740 ZMYM2Q9UBW7 1377 aa15.27■□□□□ 0.04
MSH5-202ENST00000375740 AGPSO00116 658 aa15.27■□□□□ 0.04
MSH5-202ENST00000375740 FLOT1O75955 427 aa15.27■□□□□ 0.04
MSH5-202ENST00000375740 PON1P27169 355 aa15.27■□□□□ 0.04
MSH5-202ENST00000375740 AARSP49588 968 aaKnown RBP eCLIP15.27■□□□□ 0.042e-6■■■■■ 67
MSH5-202ENST00000375740 ZNF131P52739 623 aa15.27■□□□□ 0.04
MSH5-202ENST00000375740 TBC1D10BQ4KMP7 808 aaPredicted RBP15.27■□□□□ 0.04
MSH5-202ENST00000375740 MIER3Q7Z3K6 550 aa15.27■□□□□ 0.04
MSH5-202ENST00000375740 MICALL2Q8IY33 904 aa15.27■□□□□ 0.04
MSH5-202ENST00000375740 SYTL5Q8TDW5 730 aaPredicted RBP15.27■□□□□ 0.04
MSH5-202ENST00000375740 PLCB1Q9NQ66 1216 aa15.27■□□□□ 0.04
MSH5-202ENST00000375740 MYH10P35580 1976 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 DHX15O43143 795 aaKnown RBP15.27■□□□□ 0.03
MSH5-202ENST00000375740 RPS12P25398 132 aaKnown RBP15.27■□□□□ 0.03
MSH5-202ENST00000375740 GMPSP49915 693 aaPredicted RBP15.27■□□□□ 0.03
MSH5-202ENST00000375740 MRPS9P82933 396 aaKnown RBP15.27■□□□□ 0.03
MSH5-202ENST00000375740 KLHL30Q0D2K2 578 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 COG2Q14746 738 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 ASIC2Q16515 512 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 EXOC3L4Q17RC7 722 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 TKFCQ3LXA3 575 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 KLHDC7AQ5VTJ3 777 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 FAM178BQ8IXR5 827 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 SLC35C1Q96A29 364 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 TAAR1Q96RJ0 339 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 GBP3Q9H0R5 595 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 KCND2Q9NZV8 630 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 SEL1LQ9UBV2 794 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 HACL1Q9UJ83 578 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 UBIAD1Q9Y5Z9 338 aa15.27■□□□□ 0.03
MSH5-202ENST00000375740 CCDC172P0C7W6 258 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 CKAP4Q07065 602 aaKnown RBP15.26■□□□□ 0.03
MSH5-202ENST00000375740 MTMR2Q13614 643 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 ODR4Q5SWX8 454 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 NBPF12Q5TAG4 269 aaPredicted RBP15.26■□□□□ 0.03
MSH5-202ENST00000375740 WDR93Q6P2C0 686 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 BORCS6Q96GS4 357 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.26■□□□□ 0.03
MSH5-202ENST00000375740 AGO4Q9HCK5 861 aaKnown RBP15.26■□□□□ 0.03
MSH5-202ENST00000375740 CNOT7Q9UIV1 285 aaKnown RBP15.26■□□□□ 0.03
MSH5-202ENST00000375740 ODF2LQ9ULJ1 636 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms