RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 GBF1Q92538 1859 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 ABHD14A-ACY1A0A1B0GW23 586 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.87■□□□□ 0.45
C11orf88-202ENST00000375618 STX6O43752 255 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 MAFO75444 373 aaPredicted RBP17.87■□□□□ 0.45
C11orf88-202ENST00000375618 ATP2A2P16615 1042 aaKnown RBP17.87■□□□□ 0.45
C11orf88-202ENST00000375618 CDC25AP30304 524 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 PRPHP41219 470 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 TMEM266Q2M3C6 531 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 POTEGQ6S5H5 508 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 TSHZ1Q6ZSZ6 1077 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 BRAPQ7Z569 592 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 NEK9Q8TD19 979 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 PIGOQ8TEQ8 1089 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 LINC01599Q8WXQ3 324 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 SEPT8Q92599 483 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 OSMRQ99650 979 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 MTIF3Q9H2K0 278 aaKnown RBP17.87■□□□□ 0.45
C11orf88-202ENST00000375618 DHX33Q9H6R0 707 aaKnown RBP17.87■□□□□ 0.45
C11orf88-202ENST00000375618 GINS2Q9Y248 185 aa17.87■□□□□ 0.45
C11orf88-202ENST00000375618 NOC2LQ9Y3T9 749 aaKnown RBP17.87■□□□□ 0.45
C11orf88-202ENST00000375618 LOXHD1Q8IVV2 1947 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 DKC1O60832 514 aaKnown RBP eCLIP17.86■□□□□ 0.45
C11orf88-202ENST00000375618 ARHGEF15O94989 841 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 RPLP2P05387 115 aaKnown RBP17.86■□□□□ 0.45
C11orf88-202ENST00000375618 DNAJB2P25686 324 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 PKP1Q13835 747 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 IKBKEQ14164 716 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 XKR9Q5GH70 373 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 RTN4RL1Q86UN2 441 aaPredicted RBP17.86■□□□□ 0.45
C11orf88-202ENST00000375618 MMTAG2Q9BU76 263 aaKnown RBP17.86■□□□□ 0.45
C11orf88-202ENST00000375618 POLR3CQ9BUI4 534 aaPredicted RBP17.86■□□□□ 0.45
C11orf88-202ENST00000375618 TTYH1Q9H313 450 aaPredicted RBP17.86■□□□□ 0.45
C11orf88-202ENST00000375618 TMX1Q9H3N1 280 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 TUFT1Q9NNX1 390 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 XPNPEP1Q9NQW7 623 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 AKT3Q9Y243 479 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 CLIC4Q9Y696 253 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 MICAL3Q7RTP6 2002 aa17.86■□□□□ 0.45
C11orf88-202ENST00000375618 LAD1O00515 517 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 RPA1P27694 616 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 RARRES1P49788 294 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 GPC3P51654 580 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 NLRP11P59045 1033 aaKnown RBP17.85■□□□□ 0.45
C11orf88-202ENST00000375618 GRIN1Q05586 938 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 PTPAQ15257 358 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 KSR1Q8IVT5 923 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 HERC6Q8IVU3 1022 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 ERVK-5Q9HDB9 667 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 ANKEF1Q9NU02 776 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 PADI3Q9ULW8 664 aa17.85■□□□□ 0.45
C11orf88-202ENST00000375618 M0QZ92 97 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 CCT6AP40227 531 aaKnown RBP17.84■□□□□ 0.45
C11orf88-202ENST00000375618 CRYBB1P53674 252 aaPredicted RBP17.84■□□□□ 0.45
C11orf88-202ENST00000375618 PDIA5Q14554 519 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 EMC2Q15006 297 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 SF3A1Q15459 793 aaKnown RBP17.84■□□□□ 0.45
C11orf88-202ENST00000375618 FOXD4L5Q5VV16 416 aaPredicted RBP17.84■□□□□ 0.45
C11orf88-202ENST00000375618 DTHD1Q6ZMT9 781 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 FAM228AQ86W67 206 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 FOXD4L4Q8WXT5 416 aaPredicted RBP17.84■□□□□ 0.45
C11orf88-202ENST00000375618 TMEM143Q96AN5 459 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 MAP7D2Q96T17 732 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 SLC9A7Q96T83 725 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 NKX2-4Q9H2Z4 354 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 SUCLA2Q9P2R7 463 aaPredicted RBP17.84■□□□□ 0.45
C11orf88-202ENST00000375618 LRWD1Q9UFC0 647 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 SQORQ9Y6N5 450 aa17.84■□□□□ 0.45
C11orf88-202ENST00000375618 VWA3AA6NCI4 1184 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 MGEA5O60502 916 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 CSDE1O75534 798 aaKnown RBP17.83■□□□□ 0.44
C11orf88-202ENST00000375618 TMOD1P28289 359 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 RFC5P40937 340 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 KCNJ6P48051 423 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 POLGP54098 1239 aaPredicted RBP17.83■□□□□ 0.44
C11orf88-202ENST00000375618 GPR153Q6NV75 609 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 OTUD6AQ7L8S5 288 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 KCNK18Q7Z418 384 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 PHOSPHO2Q8TCD6 241 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 SNX29Q8TEQ0 813 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 APBB2Q92870 758 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 FAM161BQ96MY7 647 aa17.83■□□□□ 0.44
C11orf88-202ENST00000375618 LCHNA4D1U4 455 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 ENPP3O14638 875 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
C11orf88-202ENST00000375618 FGFR4P22455 802 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 FAM117BQ6P1L5 589 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 SPRED2Q7Z698 418 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 ERMNQ8TAM6 284 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 SLC7A3Q8WY07 619 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 TIFAQ96CG3 184 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 PNMA5Q96PV4 448 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 USP28Q96RU2 1077 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 PPME1Q9Y570 386 aa17.82■□□□□ 0.44
C11orf88-202ENST00000375618 COL4A6Q14031 1691 aa17.81■□□□□ 0.44
C11orf88-202ENST00000375618 A0A087WZ62 844 aa17.81■□□□□ 0.44
C11orf88-202ENST00000375618 EFCAB14O75071 495 aa17.81■□□□□ 0.44
C11orf88-202ENST00000375618 RPS6KA5O75582 802 aa17.81■□□□□ 0.44
C11orf88-202ENST00000375618 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.44
C11orf88-202ENST00000375618 DARSP14868 501 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms