RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FAM133AQ8N9E0 248 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 TAF4BQ92750 862 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 GOPCQ9HD26 462 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 KCND2Q9NZV8 630 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 SALL4Q9UJQ4 1053 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 INTUQ9ULD6 942 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 PRR12Q9ULL5 1215 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 GOLGA8KD6RF30 607 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 BUB1O43683 1085 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 PALMO75781 387 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 FLOT1O75955 427 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 PRPF6O94906 941 aaKnown RBP15.25■□□□□ 0.03
HMGCL-203ENST00000374490 FAM13AO94988 1023 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 SYF2O95926 243 aaKnown RBP15.25■□□□□ 0.03
HMGCL-203ENST00000374490 UCHL3P15374 230 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 STAT2P52630 851 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 PSMC6P62333 389 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 APBA1Q02410 837 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 RAD51AP2Q09MP3 1159 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 KIAA0753Q2KHM9 967 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 NBPF9Q3BBW0 867 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 ANKRD13CQ8N6S4 541 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 TRPM4Q8TD43 1214 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 P2RX7Q99572 595 aaKnown RBP15.25■□□□□ 0.03
HMGCL-203ENST00000374490 MKNK1Q9BUB5 465 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 BHMT2Q9H2M3 363 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 FAM204AQ9H8W3 233 aa15.25■□□□□ 0.03
HMGCL-203ENST00000374490 A0A087X0T9 212 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 GCOM1H8Y6P7 765 aaPredicted RBP15.24■□□□□ 0.03
HMGCL-203ENST00000374490 MEIS1O00470 390 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 NCK2O43639 380 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 PLA2G6O60733 806 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 AOC2O75106 756 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 GCNT3O95395 438 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 FAM228BP0C875 321 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 POLR2MP0CAP2 368 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 MYBP10242 640 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 FERP16591 822 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 ERCC3P19447 782 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 KLRC1P26715 233 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 CASP5P51878 434 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 HIRAP54198 1017 aaPredicted RBP15.24■□□□□ 0.03
HMGCL-203ENST00000374490 PPP2R5CQ13362 524 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 EPHA7Q15375 998 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 DPY19L2P1Q6NXN4 242 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 SND1Q7KZF4 910 aaKnown RBP eCLIP15.24■□□□□ 0.03
HMGCL-203ENST00000374490 CHURC1Q8WUH1 139 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 LMBR1Q8WVP7 490 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.24■□□□□ 0.03
HMGCL-203ENST00000374490 PBKQ96KB5 322 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 WDR11Q9BZH6 1224 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 ASTN1O14525 1302 aa15.24■□□□□ 0.03
HMGCL-203ENST00000374490 IGLV3-22A0A075B6J6 115 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 A0A0A6YYK5 440 aaPredicted RBP15.23■□□□□ 0.03
HMGCL-203ENST00000374490 SHTN1A0MZ66 631 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 OPLAHO14841 1288 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 MYBL2P10244 700 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 PON1P27169 355 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 TNNC1P63316 161 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 SETQ01105 290 aaPredicted RBP15.23■□□□□ 0.03
HMGCL-203ENST00000374490 PAK2Q13177 524 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 SHROOM1Q2M3G4 852 aaPredicted RBP15.23■□□□□ 0.03
HMGCL-203ENST00000374490 RINT1Q6NUQ1 792 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 IRF2BP2Q7Z5L9 587 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 FAM160B2Q86V87 743 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 EIF1ADQ8N9N8 165 aaKnown RBP15.23■□□□□ 0.03
HMGCL-203ENST00000374490 NEK9Q8TD19 979 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 SLC5A5Q92911 643 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 HSD17B14Q9BPX1 270 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 RUSC1Q9BVN2 902 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 TMEM39BQ9GZU3 492 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 TSPYL1Q9H0U9 437 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 TMX2Q9Y320 296 aa15.23■□□□□ 0.03
HMGCL-203ENST00000374490 MRPL11Q9Y3B7 192 aaKnown RBP15.23■□□□□ 0.03
HMGCL-203ENST00000374490 A6NNZ2 444 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 ZMYND10O75800 440 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 AKAP3O75969 853 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 HOXD13P35453 343 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 PSMC2P35998 433 aaKnown RBP15.22■□□□□ 0.03
HMGCL-203ENST00000374490 SNAP25P60880 206 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 PPFIA1Q13136 1202 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 TUBB8Q3ZCM7 444 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 LRCH2Q5VUJ6 765 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 RUFY1Q96T51 708 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 GDF3Q9NR23 364 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 RBM12Q9NTZ6 932 aaKnown RBP15.22■□□□□ 0.03
HMGCL-203ENST00000374490 ADAMTS1Q9UHI8 967 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 DMGDHQ9UI17 866 aaKnown RBP15.22■□□□□ 0.03
HMGCL-203ENST00000374490 ODF2LQ9ULJ1 636 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 FRMPD4Q14CM0 1322 aa15.22■□□□□ 0.03
HMGCL-203ENST00000374490 TBC1D12O60347 775 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 HSF2BPO75031 334 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 PSMD10O75832 226 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 SLC9A1P19634 815 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 CXCR5P32302 372 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 GGCXP38435 758 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 STAT1P42224 750 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 MATR3P43243 847 aaKnown RBP eCLIP15.21■□□□□ 0.032e-8■■■□□ 16.9
HMGCL-203ENST00000374490 NPEPPSP55786 919 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 JAM2P57087 298 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms