RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PSMC4P43686 418 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 POU5F1Q01860 360 aaKnown RBP13.99□□□□□ -0.17
PRPF4-201ENST00000374198 SLC29A2Q14542 456 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 SEC23AQ15436 765 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 UCMAQ8WVF2 138 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 RMDN2Q96LZ7 410 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 TRIM9Q9C026 710 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 STMN4Q9H169 189 aaPredicted RBP13.99□□□□□ -0.17
PRPF4-201ENST00000374198 ZWILCHQ9H900 591 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 DMAP1Q9NPF5 467 aaPredicted RBP13.99□□□□□ -0.17
PRPF4-201ENST00000374198 ZDHHC18Q9NUE0 388 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 ADAMTS1Q9UHI8 967 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 PHF24Q9UPV7 400 aa13.99□□□□□ -0.17
PRPF4-201ENST00000374198 TIAM2Q8IVF5 1701 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 PNPLA7Q6ZV29 1317 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 GM2AP17900 193 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 HMGB2P26583 209 aaKnown RBP13.98□□□□□ -0.17
PRPF4-201ENST00000374198 NLRP5P59047 1200 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 MTA1Q13330 715 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 COBLL1Q53SF7 1204 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 FAM83BQ5T0W9 1011 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 TAOK1Q7L7X3 1001 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 LRRC57Q8N9N7 239 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 RBBP8NLQ8NC74 664 aaPredicted RBP13.98□□□□□ -0.17
PRPF4-201ENST00000374198 ZNF512BQ96KM6 892 aaPredicted RBP13.98□□□□□ -0.17
PRPF4-201ENST00000374198 MMTAG2Q9BU76 263 aaKnown RBP13.98□□□□□ -0.17
PRPF4-201ENST00000374198 CCSER1Q9C0I3 900 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 TNKSO95271 1327 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 ASIC1P78348 528 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 PTPROQ16827 1216 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 CCDC152Q4G0S7 254 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 PABPC1LQ4VXU2 614 aaKnown RBP13.98□□□□□ -0.17
PRPF4-201ENST00000374198 TNFAIP8L3Q5GJ75 292 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 SESTD1Q86VW0 696 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 DDX23Q9BUQ8 820 aaKnown RBP13.98□□□□□ -0.17
PRPF4-201ENST00000374198 PDGFDQ9GZP0 370 aaPredicted RBP13.98□□□□□ -0.17
PRPF4-201ENST00000374198 CCDC113Q9H0I3 377 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 ARMT1Q9H993 441 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 TXLNGQ9NUQ3 528 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 DNAAF2Q9NVR5 837 aaKnown RBP13.98□□□□□ -0.17
PRPF4-201ENST00000374198 CTTNBP2NLQ9P2B4 639 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 CNOT7Q9UIV1 285 aaKnown RBP13.98□□□□□ -0.17
PRPF4-201ENST00000374198 ADAMTS7Q9UKP4 1686 aa13.98□□□□□ -0.17
PRPF4-201ENST00000374198 SMAPO00193 183 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 NOL4O94818 638 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 SCNN1BP51168 640 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 RNASELQ05823 741 aaKnown RBP13.97□□□□□ -0.17
PRPF4-201ENST00000374198 CCDC15Q0P6D6 951 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 LRRC14Q15048 493 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 KIAA0895Q8NCT3 520 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 FAM13CQ8NE31 585 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 TMEM109Q9BVC6 243 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 LRMDAQ9H2I8 198 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 CUEDC2Q9H467 287 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 MAGEF1Q9HAY2 307 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 BLOC1S6Q9UL45 172 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 ADAMTS3O15072 1205 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 ZBTB7AO95365 584 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 FGFR1OPO95684 399 aaKnown RBP13.97□□□□□ -0.17
PRPF4-201ENST00000374198 TPP2P29144 1249 aaPredicted RBP13.97□□□□□ -0.17
PRPF4-201ENST00000374198 KLRC3Q07444 240 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 MYBPC3Q14896 1274 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 MUM1Q2TAK8 710 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 RNF43Q68DV7 783 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 CNNM4Q6P4Q7 775 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 AGGF1Q8N302 714 aaeCLIP13.97□□□□□ -0.17
PRPF4-201ENST00000374198 ANKLE1Q8NAG6 615 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 HPS3Q969F9 1004 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 OPTNQ96CV9 577 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 C7orf25Q9BPX7 421 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
PRPF4-201ENST00000374198 SUDS3Q9H7L9 328 aaPredicted RBP13.97□□□□□ -0.17
PRPF4-201ENST00000374198 SCN11AQ9UI33 1791 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 PAPPAQ13219 1627 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 CHD4Q14839 1912 aa13.97□□□□□ -0.17
PRPF4-201ENST00000374198 HGSO14964 777 aaPredicted RBP13.96□□□□□ -0.17
PRPF4-201ENST00000374198 PRKAB2O43741 272 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 AFPP02771 609 aaKnown RBP13.96□□□□□ -0.17
PRPF4-201ENST00000374198 MGAT5Q09328 741 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 DUPD1Q68J44 220 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 DAAM2Q86T65 1068 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 EPS8L3Q8TE67 593 aaKnown RBP13.96□□□□□ -0.17
PRPF4-201ENST00000374198 ZNF333Q96JL9 665 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 NDNQ99608 321 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 TANGO6Q9C0B7 1094 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 OCEL1Q9H607 264 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 ATP8A2Q9NTI2 1148 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 KLHL14Q9P2G3 628 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 LRCH1Q9Y2L9 728 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 AKAP11Q9UKA4 1901 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 SLCO1A2P46721 670 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 POLR2FP61218 127 aaKnown RBP13.96□□□□□ -0.17
PRPF4-201ENST00000374198 ARID5AQ03989 594 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 MGARPQ8TDB4 240 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 MMADHCQ9H3L0 296 aaPredicted RBP13.96□□□□□ -0.17
PRPF4-201ENST00000374198 ATXN10Q9UBB4 475 aa13.96□□□□□ -0.17
PRPF4-201ENST00000374198 NVLO15381 856 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms