RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 POLGP54098 1239 aaPredicted RBP13.44□□□□□ -0.26
HDAC8-201ENST00000373554 DEFB103AP81534 67 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 KIZQ2M2Z5 673 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 TCTN1Q2MV58 587 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 HERC6Q8IVU3 1022 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 EXOC8Q8IYI6 725 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 DEFB123Q8N688 67 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 LINC01465Q8N7H1 131 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 SCLT1Q96NL6 688 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 PPP1R16BQ96T49 567 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 OSBPL7Q9BZF2 842 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 PCDHA11Q9Y5I1 949 aa13.44□□□□□ -0.26
HDAC8-201ENST00000373554 MAFO75444 373 aaPredicted RBP13.43□□□□□ -0.26
HDAC8-201ENST00000373554 LYPLA2O95372 231 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 CD52P31358 61 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 PBX2P40425 430 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 PRPHP41219 470 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 RABGGTBP53611 331 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 CRYBB1P53674 252 aaPredicted RBP13.43□□□□□ -0.26
HDAC8-201ENST00000373554 NPEPPSP55786 919 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 XKR9Q5GH70 373 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 ODR4Q5SWX8 454 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 Q7L0L9 218 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 FERMT3Q86UX7 667 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 MYOCDQ8IZQ8 938 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 C4orf32Q8N8J7 132 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 CEP89Q96ST8 783 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 OSMRQ99650 979 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 FTHL17Q9BXU8 183 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 AGO3Q9H9G7 860 aaKnown RBP13.43□□□□□ -0.26
HDAC8-201ENST00000373554 TUFT1Q9NNX1 390 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 LRWD1Q9UFC0 647 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 STK24Q9Y6E0 443 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 SZT2Q5T011 3432 aa13.43□□□□□ -0.26
HDAC8-201ENST00000373554 IGKV6-21A0A0C4DH24 114 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 TLL1O43897 1013 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 GAS2O43903 313 aaKnown RBP13.42□□□□□ -0.26
HDAC8-201ENST00000373554 RPS6KA5O75582 802 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 RPA1P27694 616 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 NLRP11P59045 1033 aaKnown RBP13.42□□□□□ -0.26
HDAC8-201ENST00000373554 ATP2C1P98194 919 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-201ENST00000373554 CDC42EP1Q00587 391 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 NFX1Q12986 1120 aaKnown RBP13.42□□□□□ -0.26
HDAC8-201ENST00000373554 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-201ENST00000373554 PDIA5Q14554 519 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 DTHD1Q6ZMT9 781 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
HDAC8-201ENST00000373554 FAM43BQ6ZT52 329 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-201ENST00000373554 TMEM40Q8WWA1 233 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 NLRP7Q8WX94 980 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 POLR3CQ9BUI4 534 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-201ENST00000373554 DHX33Q9H6R0 707 aaKnown RBP13.42□□□□□ -0.26
HDAC8-201ENST00000373554 SLC28A3Q9HAS3 691 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 ANKEF1Q9NU02 776 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 PADI3Q9ULW8 664 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 MICAL3Q7RTP6 2002 aa13.42□□□□□ -0.26
HDAC8-201ENST00000373554 GPR182O15218 404 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 STX6O43752 255 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 GPR32O75388 356 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 MED24O75448 989 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 GJB5O95377 273 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 BMP15O95972 392 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 SPATA31C1P0DKV0 1188 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 GPC3P51654 580 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 DRP2Q13474 957 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 EMC2Q15006 297 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 PPP2R2DQ66LE6 453 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 CATSPER3Q86XQ3 398 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 IGSF22Q8N9C0 903 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
HDAC8-201ENST00000373554 SNX29Q8TEQ0 813 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 TCP11Q8WWU5 503 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 PSPC1Q8WXF1 523 aaKnown RBP13.41□□□□□ -0.26
HDAC8-201ENST00000373554 FAM161BQ96MY7 647 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 MTRQ99707 1265 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 NKX2-4Q9H2Z4 354 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 ZNF576Q9H609 170 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 CDHR5Q9HBB8 845 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 BMP2KQ9NSY1 1161 aaPredicted RBP13.41□□□□□ -0.26
HDAC8-201ENST00000373554 SUCLA2Q9P2R7 463 aaPredicted RBP13.41□□□□□ -0.26
HDAC8-201ENST00000373554 YBX2Q9Y2T7 364 aaKnown RBP13.41□□□□□ -0.26
HDAC8-201ENST00000373554 ARID2Q68CP9 1835 aa13.41□□□□□ -0.26
HDAC8-201ENST00000373554 EVPLQ92817 2033 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.4□□□□□ -0.26
HDAC8-201ENST00000373554 RBAK-RBAKDNI3L0D1 243 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 ZBTB39O15060 712 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 DGAT1O75907 488 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 CA3P07451 260 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 XRCC6P12956 609 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC8-201ENST00000373554 MUTP22033 750 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 EIF4BP23588 611 aaKnown RBP13.4□□□□□ -0.26
HDAC8-201ENST00000373554 CCT6AP40227 531 aaKnown RBP13.4□□□□□ -0.26
HDAC8-201ENST00000373554 RARRES1P49788 294 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 KRT79Q5XKE5 535 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 ARL6IP4Q66PJ3 421 aaKnown RBP13.4□□□□□ -0.26
HDAC8-201ENST00000373554 FAM117BQ6P1L5 589 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
HDAC8-201ENST00000373554 TMCO2Q7Z6W1 182 aaPredicted RBP13.4□□□□□ -0.26
HDAC8-201ENST00000373554 ZNF410Q86VK4 478 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms