RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 ARAP2Q8WZ64 1704 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 PALM3A6NDB9 673 aaPredicted RBP7.08□□□□□ -1.28
CHD6-203ENST00000373233 DDHD2O94830 711 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 CDC27P30260 824 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 CACNB3P54284 484 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 DDR1Q08345 913 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 GLE1Q53GS7 698 aaKnown RBP7.08□□□□□ -1.28
CHD6-203ENST00000373233 SGMS1Q86VZ5 419 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 DCAF4Q8WV16 495 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 CLIC6Q96NY7 704 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 CSRNP2Q9H175 543 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 H7C1D1 291 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 DEAF1O75398 565 aaPredicted RBP7.08□□□□□ -1.28
CHD6-203ENST00000373233 BIRC3Q13489 604 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 STXBP4Q6ZWJ1 553 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 RFWD2Q8NHY2 731 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.08□□□□□ -1.28
CHD6-203ENST00000373233 PI4KBQ9UBF8 816 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 POLLQ9UGP5 575 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 EIF3HO15372 352 aaKnown RBP eCLIP7.08□□□□□ -1.288e-7■■□□□ 12
CHD6-203ENST00000373233 GSTA2P09210 222 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 KCNA2P16389 499 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 SLC39A14Q15043 492 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 DCAF15Q66K64 600 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 RSBN1LQ6PCB5 846 aaPredicted RBP7.08□□□□□ -1.28
CHD6-203ENST00000373233 PODNQ7Z5L7 613 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 PSTPIP2Q9H939 334 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 EHD2Q9NZN4 543 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 FLT1P17948 1338 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 MYO18AQ92614 2054 aaKnown RBP7.08□□□□□ -1.28
CHD6-203ENST00000373233 FLOT2Q14254 428 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 MTRQ99707 1265 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 KIAA1468Q9P260 1216 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 HEXIM1O94992 359 aaKnown RBP7.08□□□□□ -1.28
CHD6-203ENST00000373233 NDUFA8P51970 172 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 ZNF827Q17R98 1081 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 ADGRA1Q86SQ6 560 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 HINFPQ9BQA5 517 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 ZNF277Q9NRM2 450 aaPredicted RBP7.08□□□□□ -1.28
CHD6-203ENST00000373233 CROCCQ5TZA2 2017 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
CHD6-203ENST00000373233 KLHL25Q9H0H3 589 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.08□□□□□ -1.28
CHD6-203ENST00000373233 ITIH3Q06033 890 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 LRGUKQ96M69 825 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 POLE3Q9NRF9 147 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 FGFR1OP2Q9NVK5 253 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 PARP2Q9UGN5 583 aa7.08□□□□□ -1.28
CHD6-203ENST00000373233 TAF1LQ8IZX4 1826 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 TBC1D8O95759 1140 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 C12orf60Q5U649 245 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 CIAPIN1Q6FI81 312 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 ELMSAN1Q6PJG2 1045 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 FAM133AQ8N9E0 248 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 LRRC4BQ9NT99 713 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 RCOR1Q9UKL0 485 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 CAB39Q9Y376 341 aaPredicted RBP7.07□□□□□ -1.28
CHD6-203ENST00000373233 COL5A3P25940 1745 aaPredicted RBP7.07□□□□□ -1.28
CHD6-203ENST00000373233 TRAPPC10P48553 1259 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 AP1B1Q10567 949 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 PAK1Q13153 545 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 BEND6Q5SZJ8 279 aaPredicted RBP7.07□□□□□ -1.28
CHD6-203ENST00000373233 IGDCC4Q8TDY8 1250 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 PIGSQ96S52 555 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 WARS2Q9UGM6 360 aaKnown RBP7.07□□□□□ -1.28
CHD6-203ENST00000373233 hCG_1984214I3L0E3 225 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 GIPC1O14908 333 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 SLC15A2Q16348 729 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 GEN1Q17RS7 908 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 CCDC144BQ3MJ40 725 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 NFRKBQ6P4R8 1299 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 DGKHQ86XP1 1220 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 ZNF713Q8N859 430 aaPredicted RBP7.07□□□□□ -1.28
CHD6-203ENST00000373233 MIEF2Q96C03 454 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 ZNF148Q9UQR1 794 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 CAPN9O14815 690 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 PAX3P23760 479 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 CDR2Q01850 454 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 ZBTB41Q5SVQ8 909 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 KCTD1Q719H9 257 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 PKD2L1Q9P0L9 805 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 BTBD7Q9P203 1132 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 ATP6V1G1O75348 118 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 NR5A1Q13285 461 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 CHURC1Q8WUH1 139 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 TAB2Q9NYJ8 693 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 ZFP69BQ9UJL9 534 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 CLEC11AQ9Y240 323 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 SBF2Q86WG5 1849 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 DCTN3O75935 186 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 CCDC125Q86Z20 511 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 SUGP1Q8IWZ8 645 aaKnown RBP7.07□□□□□ -1.28
CHD6-203ENST00000373233 MAML1Q92585 1016 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 PANX2Q96RD6 677 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 TMEM47Q9BQJ4 181 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 MXD3Q9BW11 206 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 HPS5Q9UPZ3 1129 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 A0A1B0GW55 424 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 OR52Z1P0C646 297 aa7.07□□□□□ -1.28
CHD6-203ENST00000373233 DUX4L2P0CJ85 424 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms