RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 PTPN12Q05209 780 aaKnown RBP10.6□□□□□ -0.71
TRERF1-204ENST00000372922 TCP11X2Q5H9J9 407 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 SLC27A3Q5K4L6 730 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 LINC00301Q8NCQ3 95 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 IFT43Q96FT9 208 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 PAGE5Q96GU1 130 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 MTRQ99707 1265 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 RRP15Q9Y3B9 282 aaKnown RBP10.6□□□□□ -0.71
TRERF1-204ENST00000372922 PCDHA13Q9Y5I0 950 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 ENC1O14682 589 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 ADRA2BP18089 450 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 YWHAHQ04917 246 aaPredicted RBP10.6□□□□□ -0.71
TRERF1-204ENST00000372922 ART3Q13508 389 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 PODNQ7Z5L7 613 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 THNSL1Q8IYQ7 743 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 TTLL11Q8NHH1 800 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 TDRD7Q8NHU6 1098 aaKnown RBP10.6□□□□□ -0.71
TRERF1-204ENST00000372922 CDC26Q8NHZ8 85 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 BHMT2Q9H2M3 363 aa10.6□□□□□ -0.71
TRERF1-204ENST00000372922 PRAMEF22A3QJZ6 481 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 ZBBXA8MT70 800 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 MOCS3O95396 460 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 IFNA8P32881 189 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 GPC3P51654 580 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 PDCD2Q16342 344 aaPredicted RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 TAF1BQ53T94 588 aaPredicted RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 SNRNP48Q6IEG0 339 aaKnown RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 RHOT2Q8IXI1 618 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 KLC2Q9H0B6 622 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 EIF4A3P38919 411 aaKnown RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 DRP2Q13474 957 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 SCN4BQ8IWT1 228 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 PIDD1Q9HB75 910 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 RAVER2Q9HCJ3 691 aaKnown RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 PAIP2BQ9ULR5 123 aaKnown RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 DIS3Q9Y2L1 958 aaKnown RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 USP17L10C9JJH3 530 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 KRT14P02533 472 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 KRT76Q01546 638 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 MFSD4BQ5TF39 518 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 KRT39Q6A163 491 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 PPP1R18Q6NYC8 613 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 SYNE4Q8N205 404 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 ENOX1Q8TC92 643 aaKnown RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 ZNF302Q9NR11 478 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 ASNSD1Q9NWL6 643 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 TSC22D4Q9Y3Q8 395 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 SHROOM2Q13796 1616 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 HNRNPCL2B2RXH8 293 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 HNRNPCL1O60812 293 aaKnown RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 RWDD2BP57060 319 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 ZNF699Q32M78 642 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 ZNF568Q3ZCX4 644 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 ATG16L1Q676U5 607 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 TOGARAM2Q6ZUX3 1019 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 GRAMD1CQ8IYS0 662 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 PDIK1LQ8N165 341 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 PYROXD1Q8WU10 500 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 GPR101Q96P66 508 aaPredicted RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 NDST4Q9H3R1 872 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 PTCH1Q13635 1447 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 SFNP31947 248 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 IFNAR2P48551 515 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 SLC10A5Q5PT55 438 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 GPT2Q8TD30 523 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 FAF2Q96CS3 445 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 ZBTB18Q99592 522 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 EXOC1LA0A1B0GW35 172 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 MAN1A2O60476 641 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 RCSD1Q6JBY9 416 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 PI16Q6UXB8 463 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 NEK9Q8TD19 979 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 GIPC2Q8TF65 315 aa10.59□□□□□ -0.71
TRERF1-204ENST00000372922 NGRNQ9NPE2 291 aaKnown RBP10.59□□□□□ -0.71
TRERF1-204ENST00000372922 EIF4E1BA6NMX2 242 aaKnown RBP10.58□□□□□ -0.72
TRERF1-204ENST00000372922 CA4P22748 312 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 BTN2A1Q7KYR7 527 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
TRERF1-204ENST00000372922 BCL2L12Q9HB09 334 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 MAGI2Q86UL8 1455 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 NEMP1O14524 444 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 FTCDO95954 541 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 PLS3P13797 630 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 DPCR1Q3MIW9 517 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 SCYL3Q8IZE3 742 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 FSD1LQ9BXM9 530 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 TRIM55Q9BYV6 548 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 MAGEB5Q9BZ81 275 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 TRIM15Q9C019 465 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 ZNF212Q9UDV6 495 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 STRIP2Q9ULQ0 834 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 ZNF335Q9H4Z2 1342 aaPredicted RBP10.58□□□□□ -0.72
TRERF1-204ENST00000372922 FCER1AP12319 257 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 DR1Q01658 176 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 SERPINI1Q99574 410 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 MXD3Q9BW11 206 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 GIMAP4Q9NUV9 329 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms