RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 SERPINB7O75635 380 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 IL4RP24394 825 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 PBX1P40424 430 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 ZBTB17Q13105 803 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 MCMDC2Q4G0Z9 681 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 SATL1Q86VE3 508 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 TTLL11Q8NHH1 800 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 XAGE3Q8WTP9 111 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 RXFP1Q9HBX9 757 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 FAIMQ9NVQ4 179 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 SERTAD1Q9UHV2 236 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 MTMR7Q9Y216 660 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 METP08581 1390 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 POLR2DO15514 142 aaKnown RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 TBCAO75347 108 aaKnown RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 IDH1O75874 414 aaKnown RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 S100BP04271 92 aaPredicted RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 PPP1R2P41236 205 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 PPP1R2P3Q6NXS1 205 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 LRRC74BQ6ZQY2 392 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 RAVER1Q8IY67 606 aaKnown RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 ASCC2Q9H1I8 757 aaPredicted RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 SAP30BPQ9UHR5 308 aaKnown RBP11.47□□□□□ -0.57
TRERF1-203ENST00000372917 NOX1Q9Y5S8 564 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 MYO5BQ9ULV0 1848 aa11.47□□□□□ -0.57
TRERF1-203ENST00000372917 DNAJC6O75061 913 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 CDK4P11802 303 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 EEF2P13639 858 aaKnown RBP11.46□□□□□ -0.57
TRERF1-203ENST00000372917 RELAQ04206 551 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 SLC39A14Q15043 492 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 MLXIPLQ9NP71 852 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 PPP1R9AQ9ULJ8 1098 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 ARL2BPQ9Y2Y0 163 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 JCADQ9P266 1359 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 XPOTO43592 962 aaKnown RBP11.46□□□□□ -0.57
TRERF1-203ENST00000372917 UNC5CO95185 931 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 LMNAP02545 664 aaKnown RBP11.46□□□□□ -0.57
TRERF1-203ENST00000372917 AFMP43652 599 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 KIF23Q02241 960 aaPredicted RBP11.46□□□□□ -0.57
TRERF1-203ENST00000372917 TRIM14Q14142 442 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 KRT31Q15323 416 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 NEPROQ6NW34 567 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 ZNF589Q86UQ0 364 aaPredicted RBP11.46□□□□□ -0.57
TRERF1-203ENST00000372917 CCDC110Q8TBZ0 833 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.46□□□□□ -0.575e-8■■■■■ 60.3
TRERF1-203ENST00000372917 STMN2Q93045 179 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 SPZ1Q9BXG8 430 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 IRF2BPLQ9H1B7 796 aa11.46□□□□□ -0.57
TRERF1-203ENST00000372917 DENND2DQ9H6A0 471 aaPredicted RBP11.46□□□□□ -0.57
TRERF1-203ENST00000372917 PREX1Q8TCU6 1659 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 NRKQ7Z2Y5 1582 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 OVOS2A0A0J9YW53 1432 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 USP6P35125 1406 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 OVOS2Q6IE36 1432 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 WDR46O15213 610 aaKnown RBP11.46□□□□□ -0.58
TRERF1-203ENST00000372917 RAD51CO43502 376 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 NEK3P51956 506 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 EIF4A1P60842 406 aaKnown RBP11.46□□□□□ -0.58
TRERF1-203ENST00000372917 TIMM10P62072 90 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 MSLNQ13421 630 aaPredicted RBP11.46□□□□□ -0.58
TRERF1-203ENST00000372917 MTMR3Q13615 1198 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 RESP18Q5W5W9 173 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 KRT26Q7Z3Y9 468 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 AGGF1Q8N302 714 aaeCLIP11.46□□□□□ -0.58
TRERF1-203ENST00000372917 FNDC8Q8TC99 324 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 GIPC3Q8TF64 312 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 CENPTQ96BT3 561 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 GBA3Q9H227 469 aa11.46□□□□□ -0.58
TRERF1-203ENST00000372917 HBS1LQ9Y450 684 aaKnown RBP11.46□□□□□ -0.58
TRERF1-203ENST00000372917 MYH7P12883 1935 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 MYH13Q9UKX3 1938 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 H0YGN5 161 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 CSPG5O95196 566 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 AFPP02771 609 aaKnown RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 MZF1P28698 734 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 HOXC9P31274 260 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 ERFP50548 548 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 CCT8P50990 548 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 TFCP2Q12800 502 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 TTF1Q15361 905 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 FAM209AQ5JX71 171 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 NSMCE3Q96MG7 304 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 STX8Q9UNK0 236 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 NFS1Q9Y697 457 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 TBC1D12O60347 775 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 RXRAP19793 462 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 RGS2P41220 211 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 RASSF2P50749 326 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 CABP4P57796 275 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 SHROOM1Q2M3G4 852 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 KHDC1Q4VXA5 237 aaKnown RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 B3GNT6Q6ZMB0 384 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 TAOK1Q7L7X3 1001 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 APTXQ7Z2E3 356 aaKnown RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 ENDOVQ8N8Q3 282 aaKnown RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 SUCLG2Q96I99 432 aa11.45□□□□□ -0.58
TRERF1-203ENST00000372917 ZNF184Q99676 751 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-203ENST00000372917 MRPL46Q9H2W6 279 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms