RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ABTB1Q969K4 478 aaPredicted RBP12.34□□□□□ -0.43
VCL-202ENST00000372755 NEUROG2Q9H2A3 272 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 MFAP3LO75121 409 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 UNC13DQ70J99 1090 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 LZICQ8WZA0 190 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 SEPT8Q92599 483 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 DYNLL2Q96FJ2 89 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 GCOM2Q9BZD3 368 aaPredicted RBP12.34□□□□□ -0.43
VCL-202ENST00000372755 PUS7LQ9H0K6 701 aaKnown RBP12.34□□□□□ -0.43
VCL-202ENST00000372755 DNAJC12Q9UKB3 198 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 ASAP1Q9ULH1 1129 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 DNMT1P26358 1616 aaKnown RBP12.34□□□□□ -0.43
VCL-202ENST00000372755 OCA2Q04671 838 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 KRT31Q15323 416 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 TTC17Q96AE7 1141 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 MTBPQ96DY7 904 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 BHMT2Q9H2M3 363 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 INTUQ9ULD6 942 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 CTTNBP2Q8WZ74 1663 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.43
VCL-202ENST00000372755 TSPY1Q01534 308 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 PPP6R3Q5H9R7 873 aaPredicted RBP12.33□□□□□ -0.44
VCL-202ENST00000372755 COA1Q9GZY4 146 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 PPARGC1AQ9UBK2 798 aaKnown RBP12.33□□□□□ -0.44
VCL-202ENST00000372755 FBXO40Q9UH90 709 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 KDM5DQ9BY66 1539 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 ABCC2Q92887 1545 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 PHKA2P46019 1235 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 POLE2P56282 527 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 COPS2P61201 443 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 CUL4AQ13619 759 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 TMED8Q6PL24 325 aaPredicted RBP12.33□□□□□ -0.44
VCL-202ENST00000372755 DGKHQ86XP1 1220 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 MTRQ99707 1265 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 PLAAQ9Y263 795 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 TMED1Q13445 227 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 GRAPQ13588 217 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 IMPG1Q17R60 797 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 GRAPLQ8TC17 118 aaPredicted RBP12.33□□□□□ -0.44
VCL-202ENST00000372755 SLITRK6Q9H5Y7 841 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 CNOT8Q9UFF9 292 aaKnown RBP12.33□□□□□ -0.44
VCL-202ENST00000372755 NFU1Q9UMS0 254 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 MARK3P27448 753 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 HOXA13P31271 388 aaPredicted RBP12.33□□□□□ -0.44
VCL-202ENST00000372755 SLC7A5Q01650 507 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 MECOMQ03112 1051 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 RESTQ13127 1097 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 CAPRIN1Q14444 709 aaKnown RBP12.33□□□□□ -0.44
VCL-202ENST00000372755 PROSER3Q2NL68 480 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 PROM2Q8N271 834 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 TTC8Q8TAM2 541 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
VCL-202ENST00000372755 A0A0G2JND7 137 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 CDC25AP30304 524 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 CYP27A1Q02318 531 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 TBC1D9BQ66K14 1250 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 PDXDC1Q6P996 788 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 ACAP3Q96P50 834 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 FAM49AQ9H0Q0 323 aaPredicted RBP12.32□□□□□ -0.44
VCL-202ENST00000372755 ANAPC7Q9UJX3 599 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 HUS1O60921 280 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 SMARCA1P28370 1054 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 GPC5P78333 572 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 HABP4Q5JVS0 413 aaKnown RBP12.32□□□□□ -0.44
VCL-202ENST00000372755 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
VCL-202ENST00000372755 THNSL1Q8IYQ7 743 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.32□□□□□ -0.44
VCL-202ENST00000372755 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
VCL-202ENST00000372755 VGLL3A8MV65 326 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 RAD17O75943 681 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 PRELPP51888 382 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 PTPN21Q16825 1174 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 OSBP2Q969R2 916 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 ABCB6Q9NP58 842 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 CHCHD3Q9NX63 227 aaKnown RBP12.32□□□□□ -0.44
VCL-202ENST00000372755 NOP53Q9NZM5 478 aaKnown RBP12.32□□□□□ -0.44
VCL-202ENST00000372755 ADAMTS1Q9UHI8 967 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 SNX5Q9Y5X3 404 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 GYG2O15488 501 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 CLDN3O15551 220 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 ZRANB2O95218 330 aaKnown RBP eCLIP12.32□□□□□ -0.441e-6■■■■■ 30
VCL-202ENST00000372755 MMEP08473 750 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 HADHAP40939 763 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 STXBP2Q15833 593 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 ZNF699Q32M78 642 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 BEST2Q8NFU1 509 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 GTSE1Q9NYZ3 720 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 MOSPD1Q9UJG1 213 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 ZNF189O75820 626 aaPredicted RBP12.32□□□□□ -0.44
VCL-202ENST00000372755 CSPG5O95196 566 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 NLRP10Q86W26 655 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 ULK4Q96C45 1275 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 INPP5FQ9Y2H2 1132 aa12.32□□□□□ -0.44
VCL-202ENST00000372755 SYCE1LA8MT33 242 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms