RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 TRIM43BA6NCK2 446 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 MAGEB2O15479 319 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 POLR2DO15514 142 aaKnown RBP18.18■□□□□ 0.5
TMEM53-203ENST00000372242 GADD45BO75293 160 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-203ENST00000372242 PLA2G4BP0C869 781 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 STAT6P42226 847 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 MKRN4PQ13434 485 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-203ENST00000372242 MCM6Q14566 821 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 PADI6Q6TGC4 694 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 CCDC73Q6ZRK6 1079 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 MAEAQ7L5Y9 396 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 FSIP1Q8NA03 581 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 RAD54LQ92698 747 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 TRIM43Q96BQ3 446 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-203ENST00000372242 DHX58Q96C10 678 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 POLD4Q9HCU8 107 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 TBX21Q9UL17 535 aa18.18■□□□□ 0.5
TMEM53-203ENST00000372242 TNRC18O15417 2968 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-203ENST00000372242 IGKV6-21A0A0C4DH24 114 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 RFC5P40937 340 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 RGS19P49795 217 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 NDUFA8P51970 172 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 TMEM62Q0P6H9 643 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 EMC2Q15006 297 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 CSPP1Q1MSJ5 1256 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 UMODL1Q5DID0 1318 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 TAF2Q6P1X5 1199 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 KIAA0319LQ8IZA0 1049 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 RETREG2Q8NC44 543 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 MRPS27Q92552 414 aaKnown RBP18.17■□□□□ 0.5
TMEM53-203ENST00000372242 LARP4BQ92615 738 aaKnown RBP18.17■□□□□ 0.5
TMEM53-203ENST00000372242 TMEM143Q96AN5 459 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 PPP1R12CQ9BZL4 782 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 XPNPEP1Q9NQW7 623 aa18.17■□□□□ 0.5
TMEM53-203ENST00000372242 SMIM35A0A1B0GVV1 85 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 PRPF40AO75400 957 aaKnown RBP18.16■□□□□ 0.5
TMEM53-203ENST00000372242 DGAT1O75907 488 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 THPOP40225 353 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 SLC12A3P55017 1021 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 E2F4Q16254 413 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 TRIM71Q2Q1W2 868 aaKnown RBP18.16■□□□□ 0.5
TMEM53-203ENST00000372242 KCTD17Q8N5Z5 321 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 LINC01465Q8N7H1 131 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 SYT2Q8N9I0 419 aaPredicted RBP18.16■□□□□ 0.5
TMEM53-203ENST00000372242 TMEM87AQ8NBN3 555 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 PPP1R16BQ96T49 567 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 NOC4LQ9BVI4 516 aaKnown RBP18.16■□□□□ 0.5
TMEM53-203ENST00000372242 RUSC1Q9BVN2 902 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 HIPK3Q9H422 1215 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 STK17AQ9UEE5 414 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 HPSEQ9Y251 543 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 PPME1Q9Y570 386 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 VTNP04004 478 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 CTSHP09668 335 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 SYN1P17600 705 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 ITGB8P26012 769 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 RAD51AP2Q09MP3 1159 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 RINT1Q6NUQ1 792 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 GBP4Q96PP9 640 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 MTRQ99707 1265 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 ATP6V0A4Q9HBG4 840 aa18.16■□□□□ 0.5
TMEM53-203ENST00000372242 LOXHD1Q8IVV2 1947 aa18.15■□□□□ 0.5
TMEM53-203ENST00000372242 CKBP12277 381 aa18.15■□□□□ 0.5
TMEM53-203ENST00000372242 TMOD1P28289 359 aa18.15■□□□□ 0.5
TMEM53-203ENST00000372242 CYP2C18P33260 490 aa18.15■□□□□ 0.5
TMEM53-203ENST00000372242 ZNF618Q5T7W0 954 aa18.15■□□□□ 0.5
TMEM53-203ENST00000372242 IQUBQ8NA54 791 aa18.15■□□□□ 0.5
TMEM53-203ENST00000372242 STAMQ92783 540 aa18.15■□□□□ 0.5
TMEM53-203ENST00000372242 ZNF668Q96K58 619 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-203ENST00000372242 GPRC5CQ9NQ84 441 aa18.15■□□□□ 0.5
TMEM53-203ENST00000372242 ZMYND8Q9ULU4 1186 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-203ENST00000372242 AKT3Q9Y243 479 aa18.15■□□□□ 0.5
TMEM53-203ENST00000372242 NPHP3-ACAD11A0A0J9YXS1 232 aa18.14■□□□□ 0.5
TMEM53-203ENST00000372242 CYP11B2P19099 503 aa18.14■□□□□ 0.5
TMEM53-203ENST00000372242 ARSHQ5FYA8 562 aa18.14■□□□□ 0.5
TMEM53-203ENST00000372242 C1orf186Q6ZWK4 172 aa18.14■□□□□ 0.5
TMEM53-203ENST00000372242 GPBP1Q86WP2 473 aa18.14■□□□□ 0.5
TMEM53-203ENST00000372242 EXOC8Q8IYI6 725 aa18.14■□□□□ 0.5
TMEM53-203ENST00000372242 JPH2Q9BR39 696 aaPredicted RBP18.14■□□□□ 0.5
TMEM53-203ENST00000372242 SUCLA2Q9P2R7 463 aaPredicted RBP18.14■□□□□ 0.5
TMEM53-203ENST00000372242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.14■□□□□ 0.49
TMEM53-203ENST00000372242 FAM237AA0A1B0GTK4 181 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 KIAA0355O15063 1070 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 SYKP43405 635 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 DNM2P50570 870 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 CCL23P55773 120 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 BFSP2Q13515 415 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 FAM102BQ5T8I3 360 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 RSPH3Q86UC2 560 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 KSR1Q8IVT5 923 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 CAGE1Q8TC20 777 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 MAP7D2Q96T17 732 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 PRKAG2Q9UGJ0 569 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 SERTAD1Q9UHV2 236 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 GINS2Q9Y248 185 aa18.14■□□□□ 0.49
TMEM53-203ENST00000372242 RAG1P15918 1043 aa18.13■□□□□ 0.49
TMEM53-203ENST00000372242 CACNB1Q02641 598 aaPredicted RBP18.13■□□□□ 0.49
TMEM53-203ENST00000372242 LONRF3Q496Y0 759 aa18.13■□□□□ 0.49
TMEM53-203ENST00000372242 SV2BQ7L1I2 683 aa18.13■□□□□ 0.49
TMEM53-203ENST00000372242 RHPN2Q8IUC4 686 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms