RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 POTEDQ86YR6 584 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 RUNDC3BQ96NL0 473 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 ZWILCHQ9H900 591 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 TRPC7Q9HCX4 862 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-202ENST00000372216 NDUFAB1O14561 156 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 GRIN3BO60391 1043 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 TCP1P17987 556 aaKnown RBP10.54□□□□□ -0.72
COL4A6-202ENST00000372216 CCNE1P24864 410 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 CDC25BP30305 580 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 PHEXP78562 749 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 KRT76Q01546 638 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 STRIP1Q5VSL9 837 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 YAF2Q8IY57 180 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 NR1H4Q96RI1 486 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-202ENST00000372216 MXD3Q9BW11 206 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 RCOR1Q9UKL0 485 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 MED14O60244 1454 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 ARHGEF40Q8TER5 1519 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 GSG1L2A8MUP6 293 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 VCPP55072 806 aaKnown RBP10.54□□□□□ -0.72
COL4A6-202ENST00000372216 DDX53Q86TM3 631 aaKnown RBP10.54□□□□□ -0.72
COL4A6-202ENST00000372216 RAET1EQ8TD07 263 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 RAD54LQ92698 747 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 GABBR1Q9UBS5 961 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 STK36Q9NRP7 1315 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 STAT3P40763 770 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 CUL4AQ13619 759 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 QRICH1Q2TAL8 776 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 B4GALNT4Q76KP1 1039 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 XAB2Q9HCS7 855 aaKnown RBP10.54□□□□□ -0.72
COL4A6-202ENST00000372216 KRT82Q9NSB4 513 aa10.54□□□□□ -0.72
COL4A6-202ENST00000372216 SAMSN1Q9NSI8 373 aaKnown RBP10.54□□□□□ -0.72
COL4A6-202ENST00000372216 MGEA5O60502 916 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 PDE1BQ01064 536 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 ZNF568Q3ZCX4 644 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 OXER1Q8TDS5 423 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 MRPL47Q9HD33 250 aaKnown RBP10.53□□□□□ -0.72
COL4A6-202ENST00000372216 CLCA2Q9UQC9 943 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 BCORL1Q5H9F3 1711 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 IKBKBO14920 756 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 SLC16A4O15374 487 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 PRPSAP2O60256 369 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 GPC3P51654 580 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 MAPK6Q16659 721 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 RESP18Q5W5W9 173 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 GLYCTKQ8IVS8 523 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 MB21D2Q8IYB1 491 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-202ENST00000372216 PLA2G12BQ9BX93 195 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 COG4Q9H9E3 785 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 GJB4Q9NTQ9 266 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 MCF2LO15068 1137 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 CLDN3O15551 220 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 PPFIA4O75335 1185 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 OCM2P0CE71 109 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 OCMP0CE72 109 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-202ENST00000372216 COPB2P35606 906 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 ATP1A2P50993 1020 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 ZNF157P51786 506 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-202ENST00000372216 ARHGAP4P98171 946 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 DBN1Q16643 649 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 DARS2Q6PI48 645 aaKnown RBP10.53□□□□□ -0.72
COL4A6-202ENST00000372216 MCPH1Q8NEM0 835 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 CDKL2Q92772 493 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 AGRPO00253 132 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 PSMD14O00487 310 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 LMNB2Q03252 620 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 EZH2Q15910 746 aaKnown RBP10.53□□□□□ -0.72
COL4A6-202ENST00000372216 FAM180AQ6UWF9 173 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 SFR1Q86XK3 245 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 FAM71BQ8TC56 605 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 IQSEC2Q5JU85 1478 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 RSBN1LQ6PCB5 846 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-202ENST00000372216 ZNF34Q8IZ26 560 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
COL4A6-202ENST00000372216 POLR3FQ9H1D9 316 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-202ENST00000372216 E9PMD0 336 aa10.52□□□□□ -0.72
COL4A6-202ENST00000372216 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.72
COL4A6-202ENST00000372216 SFNP31947 248 aa10.52□□□□□ -0.72
COL4A6-202ENST00000372216 SDCCAG3Q96C92 435 aa10.52□□□□□ -0.72
COL4A6-202ENST00000372216 SLC13A4Q9UKG4 626 aa10.52□□□□□ -0.72
COL4A6-202ENST00000372216 DAGLAQ9Y4D2 1042 aa10.52□□□□□ -0.72
COL4A6-202ENST00000372216 PHLPP2Q6ZVD8 1323 aa10.52□□□□□ -0.72
COL4A6-202ENST00000372216 WDR19Q8NEZ3 1342 aa10.52□□□□□ -0.72
COL4A6-202ENST00000372216 ASB14A6NK59 587 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 TNPO2O14787 897 aaKnown RBP10.52□□□□□ -0.73
COL4A6-202ENST00000372216 SERPING1P05155 500 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 DPEP1P16444 411 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 LRRC63Q05C16 580 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 ARHGEF18Q6ZSZ5 1173 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 ATG9AQ7Z3C6 839 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 BARHL2Q9NY43 387 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 KCNH4Q9UQ05 1017 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-202ENST00000372216 DLC1Q96QB1 1528 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 PMLP29590 882 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 ZNF667Q5HYK9 610 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 NSUN4Q96CB9 384 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms