RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 CEP72Q9P209 647 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 LRFN2Q9ULH4 789 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 ZSCAN20P17040 1043 aaPredicted RBP25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 ARL6IP4Q66PJ3 421 aaKnown RBP25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 LY9Q9HBG7 655 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 RAVER2Q9HCJ3 691 aaKnown RBP25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 HACD3Q9P035 362 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 ADD3Q9UEY8 706 aaKnown RBP25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 ZNF233A6NK53 670 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 LRRC14Q15048 493 aa25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 RNF25Q96BH1 459 aaPredicted RBP25.66■■□□□ 1.7
RAPGEF1-203ENST00000372195 TMPRSS15P98073 1019 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 FMR1NBQ8N0W7 255 aaPredicted RBP25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 CCHCR1Q8TD31 782 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 LGALS16A8MUM7 142 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 ZBTB24O43167 697 aaPredicted RBP25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 HSPA4LO95757 839 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 NR3C1P04150 777 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 RFX8Q6ZV50 586 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 FLAD1Q8NFF5 587 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 TSR3Q9UJK0 312 aaKnown RBP25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 RASA4BC9J798 803 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 RASA4O43374 803 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 HSP90AA5PQ58FG0 334 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 FAM213AQ9BRX8 229 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 BSDC1Q9NW68 430 aaPredicted RBP25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 KRT80Q6KB66 452 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 PPARGC1AQ9UBK2 798 aaKnown RBP25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 ADAM21Q9UKJ8 722 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 TTC37Q6PGP7 1564 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 PDHA1P08559 390 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 PFKFB3Q16875 520 aaPredicted RBP25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 TMEM47Q9BQJ4 181 aa25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.65■■□□□ 1.7
RAPGEF1-203ENST00000372195 GOLGA8QA0A0J9YX86 632 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 GOLGA8OA6NCC3 632 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 GOLGA8NF8WBI6 632 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 OCRLQ01968 901 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 SLC24A3Q9HC58 644 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 PTCH1Q13635 1447 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 KIF1BO60333 1816 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 MYO1CO00159 1063 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 IGKV5-2P06315 115 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 KCNH2Q12809 1159 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 ANGPTL2Q9UKU9 493 aa25.64■■□□□ 1.7
RAPGEF1-203ENST00000372195 TYW5A2RUC4 315 aaKnown RBP25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 EIF3BP55884 814 aaKnown RBP25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 GRAPQ13588 217 aa25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 SRRM1Q8IYB3 904 aaKnown RBP25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 GRAPLQ8TC17 118 aaPredicted RBP25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 ADAM22Q9P0K1 906 aa25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 H7C1W4 665 aa25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 BBOX1O75936 387 aa25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 SARM1Q6SZW1 724 aa25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 ANGPTL8Q6UXH0 198 aa25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 SH3GLB2Q9NR46 395 aa25.64■■□□□ 1.69
RAPGEF1-203ENST00000372195 NLRP1Q9C000 1473 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 TJP3O95049 919 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 HSPA6P17066 643 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 PMLP29590 882 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 TXNRD1Q16881 649 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 EPM2AIP1Q7L775 607 aaPredicted RBP25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 ZC3H18Q86VM9 953 aaKnown RBP25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 ENAHQ8N8S7 591 aaPredicted RBP25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 NUP85Q9BW27 656 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 THEGQ9P2T0 379 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 POTEFA5A3E0 1075 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 POTEIP0CG38 1075 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 POTEGQ6S5H5 508 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 POTEEQ6S8J3 1075 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 TMEM270Q6UE05 265 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 DHX36Q9H2U1 1008 aaKnown RBP25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 SLC12A6Q9UHW9 1150 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.63■■□□□ 1.691e-24■■■■□ 23.9
RAPGEF1-203ENST00000372195 ARAP3Q8WWN8 1544 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 NPHP3-ACAD11A0A0J9YXS1 232 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 ACTN3Q08043 901 aaPredicted RBP25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 DSTYKQ6XUX3 929 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 PDIK1LQ8N165 341 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 SYT2Q8N9I0 419 aaPredicted RBP25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 OSBPL9Q96SU4 736 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 WDR64B1ANS9 1081 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 SPAG7O75391 227 aa25.63■■□□□ 1.69
RAPGEF1-203ENST00000372195 COPEO14579 308 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 EPHB1P54762 984 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 ATG16L1Q676U5 607 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 CRLF3Q8IUI8 442 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 DCTN4Q9UJW0 460 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 MTF1Q14872 753 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 MTMR1Q13613 665 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 PCSK1NQ9UHG2 260 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 EFCAB6Q5THR3 1501 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 FCER1AP12319 257 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 PMS2P54278 862 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 SH3BGRP55822 239 aaPredicted RBP25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 KRT27Q7Z3Y8 459 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 DDX47Q9H0S4 455 aaKnown RBP25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 PPP4R3CPQ6ZMV5 832 aa25.62■■□□□ 1.69
RAPGEF1-203ENST00000372195 PNMA2Q9UL42 364 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms