RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 FCGRTP55899 365 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 LAMC2Q13753 1193 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 OLFML2BQ68BL8 750 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 IQSEC1Q6DN90 963 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 ARMCX2Q7L311 632 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 EPM2AIP1Q7L775 607 aaPredicted RBP14.3□□□□□ -0.12
LDB3-203ENST00000372056 SEPT1Q8WYJ6 367 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 ERGIC2Q96RQ1 377 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 PDCL3Q9H2J4 239 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 MLXIPQ9HAP2 919 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 DDX41Q9UJV9 622 aaKnown RBP14.3□□□□□ -0.12
LDB3-203ENST00000372056 COL4A3BPQ9Y5P4 624 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 LCTP09848 1927 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 TTC26A0AVF1 554 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 ARHGEF35A5YM69 484 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 RSPH10B2B2RC85 870 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 RIOK3O14730 519 aaKnown RBP14.29□□□□□ -0.12
LDB3-203ENST00000372056 ZBTB39O15060 712 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 TBCAO75347 108 aaKnown RBP14.29□□□□□ -0.12
LDB3-203ENST00000372056 GNRH1P01148 92 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 RSPH10BP0C881 870 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 XRCC5P13010 732 aaKnown RBP14.29□□□□□ -0.12
LDB3-203ENST00000372056 GTF2F1P35269 517 aaKnown RBP eCLIP14.29□□□□□ -0.12
LDB3-203ENST00000372056 KRT9P35527 623 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 MTF1Q14872 753 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 SYCP1Q15431 976 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 MAN2A1Q16706 1144 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 STXBP4Q6ZWJ1 553 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 C1orf186Q6ZWK4 172 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 NELFCDQ8IXH7 590 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 ZC3H3Q8IXZ2 948 aaKnown RBP14.29□□□□□ -0.12
LDB3-203ENST00000372056 MAML3Q96JK9 1138 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 FAM167AQ96KS9 214 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 FGD4Q96M96 766 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 CEP63Q96MT8 703 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 TINF2Q9BSI4 451 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 TTYH3Q9C0H2 523 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 OLFML3Q9NRN5 406 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 PKD2L1Q9P0L9 805 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 CAPN11Q9UMQ6 739 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 ASTN1O14525 1302 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 DDX39AO00148 427 aaKnown RBP14.29□□□□□ -0.12
LDB3-203ENST00000372056 TUBB4AP04350 444 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 GUCY2CP25092 1073 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 ACTR2P61160 394 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 CRHR2Q13324 411 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 EDRF1Q3B7T1 1238 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 VWA3BQ502W6 1294 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 FKBP15Q5T1M5 1219 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 CYP4F22Q6NT55 531 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 ABHD15Q6UXT9 468 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 RAD9BQ6WBX8 426 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 RETREG2Q8NC44 543 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 ZNF592Q92610 1267 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 EMID1Q96A84 441 aaPredicted RBP14.29□□□□□ -0.12
LDB3-203ENST00000372056 DNAJC7Q99615 494 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 NDST4Q9H3R1 872 aa14.29□□□□□ -0.12
LDB3-203ENST00000372056 PLXNA1Q9UIW2 1896 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 TNPO2O14787 897 aaKnown RBP14.28□□□□□ -0.12
LDB3-203ENST00000372056 SUPT20HL2P0C7V6 817 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 HOXD10P28358 340 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 BMT2Q1RMZ1 405 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 XKR3Q5GH77 459 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 CELF3Q5SZQ8 465 aaKnown RBP14.28□□□□□ -0.12
LDB3-203ENST00000372056 TMTC1Q8IUR5 882 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 DHX37Q8IY37 1157 aaKnown RBP14.28□□□□□ -0.12
LDB3-203ENST00000372056 BANK1Q8NDB2 785 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 KIF18AQ8NI77 898 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 AFAP1L1Q8TED9 768 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 AZI2Q9H6S1 392 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 NRBP2Q9NSY0 501 aa14.28□□□□□ -0.12
LDB3-203ENST00000372056 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.28□□□□□ -0.12
LDB3-203ENST00000372056 LUC7L2Q9Y383 392 aaKnown RBP14.28□□□□□ -0.12
LDB3-203ENST00000372056 IGKV6D-21A0A0A0MT36 114 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 GOLGA6L9A6NEM1 432 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 NOP56O00567 594 aaKnown RBP14.27□□□□□ -0.12
LDB3-203ENST00000372056 PEX10O60683 326 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 FARP2O94887 1054 aaPredicted RBP14.27□□□□□ -0.12
LDB3-203ENST00000372056 TXNP10599 105 aaKnown RBP14.27□□□□□ -0.12
LDB3-203ENST00000372056 UBA1P22314 1058 aaKnown RBP14.27□□□□□ -0.12
LDB3-203ENST00000372056 YWHABP31946 246 aaKnown RBP14.27□□□□□ -0.12
LDB3-203ENST00000372056 HOXD13P35453 343 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 ALCAMQ13740 583 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 KNOP1Q1ED39 458 aaKnown RBP14.27□□□□□ -0.12
LDB3-203ENST00000372056 FIGNQ5HY92 759 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 CCDC62Q6P9F0 684 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 CYP26C1Q6V0L0 522 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 CYFIP1Q7L576 1253 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 OR8K1Q8NGG5 319 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 USP6NLQ92738 828 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 APBA2Q99767 749 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 DESI2Q9BSY9 194 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 NUP58Q9BVL2 599 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 C17orf75Q9HAS0 396 aa14.27□□□□□ -0.12
LDB3-203ENST00000372056 DYNC1I1O14576 645 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 GNA14O95837 355 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 CCNE2O96020 404 aa14.27□□□□□ -0.13
LDB3-203ENST00000372056 GH1P01241 217 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms