RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 UPF2Q9HAU5 1272 aaKnown RBP12.4□□□□□ -0.42
EXOSC1-202ENST00000370885 KCNMB3Q9NPA1 279 aa12.4□□□□□ -0.42
EXOSC1-202ENST00000370885 LMCD1Q9NZU5 365 aa12.4□□□□□ -0.42
EXOSC1-202ENST00000370885 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
EXOSC1-202ENST00000370885 VAV3Q9UKW4 847 aa12.4□□□□□ -0.42
EXOSC1-202ENST00000370885 ST3GAL5Q9UNP4 418 aa12.4□□□□□ -0.42
EXOSC1-202ENST00000370885 ADGRA3Q8IWK6 1321 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 GRM6O15303 877 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 DNAJB1P25685 340 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 BMPR1AP36894 532 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 FOSBP53539 338 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 CRYBB1P53674 252 aaPredicted RBP12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 NFX1Q12986 1120 aaKnown RBP12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 GPM6BQ13491 265 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 CAMK1Q14012 370 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 DSC3Q14574 896 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 CPLX2Q6PUV4 134 aaKnown RBP12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 MOXD1Q6UVY6 613 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 PIK3AP1Q6ZUJ8 805 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 MIER3Q7Z3K6 550 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 KRT25Q7Z3Z0 450 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 FAM177A1Q8N128 213 aaPredicted RBP12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 FIBCD1Q8N539 461 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 METTL13Q8N6R0 699 aa12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 CLP1Q92989 425 aaKnown RBP12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 DDX25Q9UHL0 483 aaKnown RBP12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 MRPL42Q9Y6G3 142 aaKnown RBP12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 FNDC1Q4ZHG4 1894 aaPredicted RBP12.39□□□□□ -0.43
EXOSC1-202ENST00000370885 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 C9IYK1 514 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 C5orf67F2Z3F1 127 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 M0QZ92 97 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 CSDE1O75534 798 aaKnown RBP12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 CDKL5O76039 1030 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 RPLP2P05387 115 aaKnown RBP12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 FGFR4P22455 802 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 SFNP31947 248 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 JAK3P52333 1124 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 NLRP11P59045 1033 aaKnown RBP12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 SPIRE1Q08AE8 756 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 PAN2Q504Q3 1202 aaKnown RBP12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 FAM102BQ5T8I3 360 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 ANO5Q75V66 913 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 NEK8Q86SG6 692 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 NPAS4Q8IUM7 802 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 MRPL38Q96DV4 380 aaKnown RBP12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 ADAM2Q99965 735 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 NIFKQ9BYG3 293 aaKnown RBP12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 RGS18Q9NS28 235 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 RNF19AQ9NV58 838 aa12.38□□□□□ -0.43
EXOSC1-202ENST00000370885 IGKV6-21A0A0C4DH24 114 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 CCDC194A0A1B0GVG4 234 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 BTBD18B2RXH4 712 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 ZBTB39O15060 712 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 IBSPP21815 317 aaPredicted RBP12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 CTNNB1P35222 781 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 FAM189BP81408 668 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 BTG3Q14201 252 aaPredicted RBP12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 ANKRD1Q15327 319 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 MTERF2Q49AM1 385 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 TCEAL5Q5H9L2 206 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 PLA2G4FQ68DD2 849 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 PPP4R3AQ6IN85 833 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 HLA-CQ95604 372 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 FAM167AQ96KS9 214 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 SAMD11Q96NU1 681 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 FTHL17Q9BXU8 183 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 ALG13Q9NP73 1137 aaKnown RBP12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 NRBP2Q9NSY0 501 aa12.37□□□□□ -0.43
EXOSC1-202ENST00000370885 PLXNA4Q9HCM2 1894 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 MAGEB2O15479 319 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 CCNT1O60563 726 aaKnown RBP12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 CSPG5O95196 566 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 GTF2F1P35269 517 aaKnown RBP eCLIP12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 SARSP49591 514 aaKnown RBP12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 GPC3P51654 580 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 NPEPPSP55786 919 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 PPP2R5CQ13362 524 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 XKR3Q5GH77 459 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 KSR1Q8IVT5 923 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 RDM1Q8NG50 284 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 UHRF1Q96T88 793 aaPredicted RBP12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 UBE2ZQ9H832 354 aaPredicted RBP12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 CD320Q9NPF0 282 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 RGL1Q9NZL6 768 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 SEPT9Q9UHD8 586 aaPredicted RBP12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 TCEAL9Q9UHQ7 104 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 COG5Q9UP83 839 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 PLAGL2Q9UPG8 496 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 CEP131Q9UPN4 1083 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 AKT3Q9Y243 479 aa12.36□□□□□ -0.43
EXOSC1-202ENST00000370885 PCDHGC5Q9Y5F6 944 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms