RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 SH2D3CQ8N5H7 860 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 NOC4LQ9BVI4 516 aaKnown RBP10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 CAPS2Q9BXY5 557 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 JADE2Q9NQC1 790 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 ADAMTS5Q9UNA0 930 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 PHIPQ8WWQ0 1821 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 MYCLP12524 364 aaPredicted RBP10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 IREB2P48200 963 aaKnown RBP10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 TSR1Q2NL82 804 aaKnown RBP10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 SH3D19Q5HYK7 790 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 SLC30A10Q6XR72 485 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 MIER3Q7Z3K6 550 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 IL31RAQ8NI17 732 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 NEK9Q8TD19 979 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 NAPGQ99747 312 aaPredicted RBP10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 MED4Q9NPJ6 270 aa10.94□□□□□ -0.66
PRPF38B-203ENST00000370025 MYPNQ86TC9 1320 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 MFAP3LO75121 409 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 YBX3P16989 372 aaKnown RBP eCLIP10.93□□□□□ -0.661e-6■■■■□ 22.5
PRPF38B-203ENST00000370025 SATB1Q01826 763 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 TBC1D8BQ0IIM8 1120 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 MTMR1Q13613 665 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 BAATQ14032 418 aaPredicted RBP10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 VGLL4Q14135 290 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 PGM5Q15124 567 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 REPS2Q8NFH8 660 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 RNF217Q8TC41 542 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 PIGOQ8TEQ8 1089 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 HNRNPLLQ8WVV9 542 aaKnown RBP10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 WNK4Q96J92 1243 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 REEP2Q9BRK0 252 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 PKD2L1Q9P0L9 805 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 COL4A3BPQ9Y5P4 624 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 PARP14Q460N5 1801 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 RBBP6Q7Z6E9 1792 aaKnown RBP10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 FRMPD4Q14CM0 1322 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 ADM5C9JUS6 153 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 DDX39AO00148 427 aaKnown RBP10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 FKBP3Q00688 224 aaKnown RBP10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 XRRA1Q6P2D8 792 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 FAM43BQ6ZT52 329 aaPredicted RBP10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 ZNF507Q8TCN5 953 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 CABS1Q96KC9 395 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 TEX13BQ9BXU2 312 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 PXMP2Q9NR77 195 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 TBC1D22BQ9NU19 505 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 RIPK3Q9Y572 518 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 PCDHA2Q9Y5H9 948 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 SNCAIPQ9Y6H5 919 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 GOLGA6BA6NDN3 693 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 B4DLN1 442 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 TRAF5O00463 557 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 ATP2A1O14983 1001 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 RPS6KA5O75582 802 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 GYPCP04921 128 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 MRPS9P82933 396 aaKnown RBP10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 NAA25Q14CX7 972 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 SND1Q7KZF4 910 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 GLIS3Q8NEA6 775 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 PDCD2LQ9BRP1 358 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 AGO4Q9HCK5 861 aaKnown RBP10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 RAB21Q9UL25 225 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 ODF2LQ9ULJ1 636 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 HPCAL4Q9UM19 191 aa10.93□□□□□ -0.66
PRPF38B-203ENST00000370025 GAP43P17677 238 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 PLS1Q14651 629 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 TMEM132BQ14DG7 1078 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 RINT1Q6NUQ1 792 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 B3GNT9Q6UX72 402 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 NELFCDQ8IXH7 590 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 ZNF214Q9UL59 606 aaPredicted RBP10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 MYO6Q9UM54 1294 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 EIF4E1BA6NMX2 242 aaKnown RBP10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 BACH1O14867 736 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 ZNF185O15231 689 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 CCND2P30279 289 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 SFR1Q86XK3 245 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 MSANTD4Q8NCY6 345 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 MMS19Q96T76 1030 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 NUP58Q9BVL2 599 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 RUSC1Q9BVN2 902 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 ACAD9Q9H845 621 aa10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 COL11A1P12107 1806 aaPredicted RBP10.92□□□□□ -0.66
PRPF38B-203ENST00000370025 FAM13AO94988 1023 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 P4HBP07237 508 aaKnown RBP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 ELF1P32519 619 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 FXR1P51114 621 aaKnown RBP eCLIP10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 SLC7A5Q01650 507 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 MAN2A1Q16706 1144 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 PPP4R3CPQ6ZMV5 832 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 SCFD1Q8WVM8 642 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 CEP63Q96MT8 703 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 LXNQ9BS40 222 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 MAF1Q9H063 256 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 KCND2Q9NZV8 630 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 RLFQ13129 1914 aa10.91□□□□□ -0.66
PRPF38B-203ENST00000370025 GNA14O95837 355 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms