RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 ZBED2Q9BTP6 218 aa23.08■■□□□ 1.29
SMNDC1-201ENST00000369592 ADAMTS10Q9H324 1103 aa23.08■■□□□ 1.29
SMNDC1-201ENST00000369592 LPXNO60711 386 aa23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 P4HBP07237 508 aaKnown RBP23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 CRYBB1P53674 252 aaPredicted RBP23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 ERVK-21P61565 698 aa23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 SAFBQ15424 915 aaKnown RBP eCLIP23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 FAM117BQ6P1L5 589 aa23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 ZNF710Q8N1W2 664 aa23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 GAS2L1Q99501 681 aaPredicted RBP23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 FTHL17Q9BXU8 183 aa23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 BACH2Q9BYV9 841 aa23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 TSPYL2Q9H2G4 693 aaPredicted RBP23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 TMEM60Q9H2L4 133 aa23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 NOC2LQ9Y3T9 749 aaKnown RBP23.07■■□□□ 1.28
SMNDC1-201ENST00000369592 VTNP04004 478 aa23.06■■□□□ 1.28
SMNDC1-201ENST00000369592 U2AF2P26368 475 aaKnown RBP eCLIP23.06■■□□□ 1.28
SMNDC1-201ENST00000369592 KIZQ2M2Z5 673 aa23.06■■□□□ 1.28
SMNDC1-201ENST00000369592 C4orf19Q8IY42 314 aa23.06■■□□□ 1.28
SMNDC1-201ENST00000369592 LRRC71Q8N4P6 559 aa23.06■■□□□ 1.28
SMNDC1-201ENST00000369592 METTL13Q8N6R0 699 aa23.06■■□□□ 1.28
SMNDC1-201ENST00000369592 HSD17B14Q9BPX1 270 aa23.06■■□□□ 1.28
SMNDC1-201ENST00000369592 COL4A4P53420 1690 aaPredicted RBP23.06■■□□□ 1.28
SMNDC1-201ENST00000369592 REV3LO60673 3130 aa23.06■■□□□ 1.28
SMNDC1-201ENST00000369592 ARID2Q68CP9 1835 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 NLRC5Q86WI3 1866 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 RFXAPO00287 272 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 NEMFO60524 1076 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 BAG4O95429 457 aaKnown RBP23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 LINC00271P0C7V0 271 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 PLA2G5P39877 138 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 MCM2P49736 904 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 DRP2Q13474 957 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 CALCRLQ16602 461 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 ZNF689Q96CS4 500 aaPredicted RBP23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 CERS4Q9HA82 394 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 RGL1Q9NZL6 768 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 SEPT9Q9UHD8 586 aaPredicted RBP23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 PCDHA12Q9UN75 941 aa23.05■■□□□ 1.28
SMNDC1-201ENST00000369592 MGEA5O60502 916 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 MAFO75444 373 aaPredicted RBP23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 SLITRK3O94933 977 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 LYPLA2O95372 231 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 TBC1D8BQ0IIM8 1120 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 PAK2Q13177 524 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 ORC2Q13416 577 aaPredicted RBP23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 TMEM266Q2M3C6 531 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 MTERF2Q49AM1 385 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 FAM228AQ86W67 206 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 NOSTRINQ8IVI9 506 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 ZNF579Q8NAF0 562 aaKnown RBP23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 FAM184AQ8NB25 1140 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 OSMRQ99650 979 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 RALGAPA2Q2PPJ7 1873 aa23.04■■□□□ 1.28
SMNDC1-201ENST00000369592 DDX11L8A8MPP1 907 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 DKC1O60832 514 aaKnown RBP eCLIP23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 RPS6KA5O75582 802 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 TMOD1P28289 359 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 GPC3P51654 580 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 NLRP11P59045 1033 aaKnown RBP23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 DSC3Q14574 896 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 C4orf32Q8N8J7 132 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 ARNTL2Q8WYA1 636 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 DYDC2Q96IM9 177 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 TGS1Q96RS0 853 aaKnown RBP23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 SH2D3AQ9BRG2 576 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 LXNQ9BS40 222 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 TTC12Q9H892 705 aaPredicted RBP23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 CYP26B1Q9NR63 512 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 ST3GAL5Q9UNP4 418 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 PPME1Q9Y570 386 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 MTCH2Q9Y6C9 303 aa23.03■■□□□ 1.28
SMNDC1-201ENST00000369592 DGKIO75912 1065 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 UPP2O95045 317 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 TRAPPC10P48553 1259 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 NPEPPSP55786 919 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 PLA2G4FQ68DD2 849 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 NCAPH2Q6IBW4 605 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 MAP7D2Q96T17 732 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 DHX33Q9H6R0 707 aaKnown RBP23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 ZSWIM4Q9H7M6 989 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 SUGCTQ9HAC7 445 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 GINS2Q9Y248 185 aa23.02■■□□□ 1.28
SMNDC1-201ENST00000369592 EIF4BP23588 611 aaKnown RBP23.01■■□□□ 1.27
SMNDC1-201ENST00000369592 TOB1P50616 345 aaPredicted RBP23.01■■□□□ 1.27
SMNDC1-201ENST00000369592 GRB10Q13322 594 aa23.01■■□□□ 1.27
SMNDC1-201ENST00000369592 FAM122AQ96E09 287 aa23.01■■□□□ 1.27
SMNDC1-201ENST00000369592 PPP1R16BQ96T49 567 aa23.01■■□□□ 1.27
SMNDC1-201ENST00000369592 YME1L1Q96TA2 773 aa23.01■■□□□ 1.27
SMNDC1-201ENST00000369592 EIF2AK1Q9BQI3 630 aaKnown RBP23.01■■□□□ 1.27
SMNDC1-201ENST00000369592 AKT3Q9Y243 479 aa23.01■■□□□ 1.27
SMNDC1-201ENST00000369592 FNDC1Q4ZHG4 1894 aaPredicted RBP23■■□□□ 1.27
SMNDC1-201ENST00000369592 C9IYK1 514 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 ZBTB39O15060 712 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 GPR182O15218 404 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 MARCH6O60337 910 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 DARSP14868 501 aaKnown RBP23■■□□□ 1.27
SMNDC1-201ENST00000369592 MCM7P33993 719 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 TXKP42681 527 aa23■■□□□ 1.27
SMNDC1-201ENST00000369592 FAM189BP81408 668 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms