RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 PGRMC1O00264 195 aaKnown RBP14.03□□□□□ -0.16
CHD1L-202ENST00000369258 EML1O00423 815 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 DRP2Q13474 957 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 PLCB4Q15147 1175 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 FAM182AQ5T1J6 154 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 CCDC65Q8IXS2 484 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 CERS5Q8N5B7 392 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 LRRC57Q8N9N7 239 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 EIF1ADQ8N9N8 165 aaKnown RBP14.03□□□□□ -0.16
CHD1L-202ENST00000369258 CNBD1Q8NA66 436 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 LNX1Q8TBB1 728 aaPredicted RBP14.03□□□□□ -0.16
CHD1L-202ENST00000369258 MGARPQ8TDB4 240 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 CUL5Q93034 780 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 TBC1D31Q96DN5 1066 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 SELENOSQ9BQE4 189 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 GPR75-ASB3A0A0A6YYF3 556 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 ESYT2A0FGR8 921 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 SPDYE3A6NKU9 549 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 UBAP1LF5GYI3 381 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 CCDC172P0C7W6 258 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 XRCC5P13010 732 aaKnown RBP14.03□□□□□ -0.16
CHD1L-202ENST00000369258 IFI35P80217 286 aaPredicted RBP14.03□□□□□ -0.16
CHD1L-202ENST00000369258 ZNF543Q08ER8 600 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 LRRC14Q15048 493 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 FAM196AQ6ZSG2 479 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 BANK1Q8NDB2 785 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 ACTR5Q9H9F9 607 aaPredicted RBP14.03□□□□□ -0.16
CHD1L-202ENST00000369258 A1CFQ9NQ94 594 aaKnown RBP14.03□□□□□ -0.16
CHD1L-202ENST00000369258 SCAF8Q9UPN6 1271 aaKnown RBP14.03□□□□□ -0.16
CHD1L-202ENST00000369258 LEMD3Q9Y2U8 911 aa14.03□□□□□ -0.16
CHD1L-202ENST00000369258 ROBO3Q96MS0 1386 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 TCRBV7S2A1N4TA0A589 114 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 CES2O00748 559 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 TRAPPC3O43617 180 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 EVI5O60447 810 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 KRT13P13646 458 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 KCNJ1P48048 391 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 PPP2R2AP63151 447 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 GSTO1P78417 241 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 IFFO1Q0D2I5 559 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 GIT2Q14161 759 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 SEPT2Q15019 361 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 DAB2IPQ5VWQ8 1189 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 DPY19L2P1Q6NXN4 242 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 CCDC25Q86WR0 208 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 ACTRT1Q8TDG2 376 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 RPGRQ92834 1020 aaKnown RBP14.02□□□□□ -0.16
CHD1L-202ENST00000369258 ZKSCAN4Q969J2 545 aaPredicted RBP14.02□□□□□ -0.16
CHD1L-202ENST00000369258 FAM212AQ96EL1 285 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 ADAM33Q9BZ11 813 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 DHX36Q9H2U1 1008 aaKnown RBP14.02□□□□□ -0.16
CHD1L-202ENST00000369258 SLC12A6Q9UHW9 1150 aa14.02□□□□□ -0.16
CHD1L-202ENST00000369258 RASSF9O75901 435 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 FGFR4P22455 802 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 SLC12A3P55017 1021 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 PPP4CP60510 307 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 GRAPQ13588 217 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 MTMR3Q13615 1198 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 CBWD6Q4V339 395 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 CBWD3Q5JTY5 395 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 CBWD5Q5RIA9 395 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 C10orf76Q5T2E6 689 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 EP400NLQ6ZTU2 488 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 GIMAP7Q8NHV1 300 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 SLC35G2Q8TBE7 412 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 GRAPLQ8TC17 118 aaPredicted RBP14.02□□□□□ -0.17
CHD1L-202ENST00000369258 C18orf8Q96DM3 657 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 FAM118BQ9BPY3 351 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.171e-9■□□□□ 10.4
CHD1L-202ENST00000369258 PCIF1Q9H4Z3 704 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 CD2APQ9Y5K6 639 aa14.02□□□□□ -0.17
CHD1L-202ENST00000369258 PNMA6FA0A0J9YX94 578 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 DDX39AO00148 427 aaKnown RBP14.01□□□□□ -0.17
CHD1L-202ENST00000369258 RPSAP08865 295 aaKnown RBP14.01□□□□□ -0.17
CHD1L-202ENST00000369258 CREB1P16220 341 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 C2CD6Q53TS8 623 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 CACNA2D3Q8IZS8 1091 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 SLC20A1Q8WUM9 679 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 ALG3Q92685 438 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 KRT35Q92764 455 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 SEC16BQ96JE7 1060 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 THAP2Q9H0W7 228 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 LDHCP07864 332 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 SPATA31C1P0DKV0 1188 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 SMARCA1P28370 1054 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 BYSLQ13895 437 aaKnown RBP14.01□□□□□ -0.17
CHD1L-202ENST00000369258 TPH2Q8IWU9 490 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 C3orf20Q8ND61 904 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 CALR3Q96L12 384 aaKnown RBP14.01□□□□□ -0.17
CHD1L-202ENST00000369258 NYXQ9GZU5 481 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 USP40Q9NVE5 1235 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 DBR1Q9UK59 544 aaKnown RBP14.01□□□□□ -0.17
CHD1L-202ENST00000369258 COG5Q9UP83 839 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 BTNL10A8MVZ5 291 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 AFPP02771 609 aaKnown RBP14.01□□□□□ -0.17
CHD1L-202ENST00000369258 AGBL2Q5U5Z8 902 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 SEPT14Q6ZU15 432 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 CPLX4Q7Z7G2 160 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 CCDC26Q8TAB7 109 aa14.01□□□□□ -0.17
CHD1L-202ENST00000369258 KAT5Q92993 513 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms