RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 MYH11P35749 1972 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 KIF1BO60333 1816 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 USP17L3A6NCW0 530 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 USP17L4A6NCW7 530 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 GOLGA8TH3BQL2 631 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 GOLGA8HP0CJ92 632 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 PDE6AP16499 860 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 CRKLP46109 303 aaKnown RBP10.77□□□□□ -0.68
SIM1-202ENST00000369208 ADARP55265 1226 aaKnown RBP10.77□□□□□ -0.68
SIM1-202ENST00000369208 IGBP1P78318 339 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 ERFEQ4G0M1 354 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 USP17L1Q7RTZ2 530 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 RBM12BQ8IXT5 1001 aaKnown RBP10.77□□□□□ -0.68
SIM1-202ENST00000369208 FMO2Q99518 471 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 PCDHB15Q9Y5E8 787 aa10.77□□□□□ -0.68
SIM1-202ENST00000369208 SCNN1DP51172 638 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 ADALQ6DHV7 355 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 ZNF554Q86TJ5 538 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 ATPIF1Q9UII2 106 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 EPN1Q9Y6I3 576 aaPredicted RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 FOXP2O15409 715 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 RGS2P41220 211 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 DSG1Q02413 1049 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 RASSF3Q86WH2 238 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 PNMA1Q8ND90 353 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 POMGNT1Q8WZA1 660 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 ZNF496Q96IT1 587 aaPredicted RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 TTC25Q96NG3 672 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 BZW2Q9Y6E2 419 aaKnown RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 TMEM94Q12767 1356 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 DNMT1P26358 1616 aaKnown RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 FOSL1P15407 271 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 RNF219Q5W0B1 726 aaPredicted RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 PCNX4Q63HM2 1172 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 ZNF654Q8IZM8 581 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 KRT12Q99456 494 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 MED23Q9ULK4 1368 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 ARHGAP31Q2M1Z3 1444 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 MAGI2Q86UL8 1455 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 RSPH10B2B2RC85 870 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 RSPH10BP0C881 870 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 KPNA2P52292 529 aaKnown RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 PDCLQ13371 301 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 PACS2Q86VP3 889 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 TNNQ9UQP3 1299 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 COMMD3-BMI1R4GMX3 469 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 POTEFA5A3E0 1075 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 MAP3K10Q02779 954 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 IFRD2Q12894 506 aaPredicted RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 R3HDM1Q15032 1099 aaKnown RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 BEND6Q5SZJ8 279 aaPredicted RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 MFSD14CQ5VZR4 134 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 PPWD1Q96BP3 646 aaKnown RBP10.77□□□□□ -0.69
SIM1-202ENST00000369208 CUEDC2Q9H467 287 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 NFE2L3Q9Y4A8 694 aa10.77□□□□□ -0.69
SIM1-202ENST00000369208 KLRF2D3W0D1 207 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 MDM2Q00987 491 aaPredicted RBP10.76□□□□□ -0.69
SIM1-202ENST00000369208 USPL1Q5W0Q7 1092 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 ATG16L1Q676U5 607 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 LRIG3Q6UXM1 1119 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 URGCPQ8TCY9 931 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 NEK9Q8TD19 979 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 MRPS26Q9BYN8 205 aaKnown RBP10.76□□□□□ -0.69
SIM1-202ENST00000369208 USP17L12C9JPN9 530 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 USP17L21D6R901 530 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 MAP4P27816 1152 aaKnown RBP10.76□□□□□ -0.69
SIM1-202ENST00000369208 POLA2Q14181 598 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 SCYL2Q6P3W7 929 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 GANCQ8TET4 914 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 ARMCX3Q9UH62 379 aaPredicted RBP10.76□□□□□ -0.69
SIM1-202ENST00000369208 MCM8Q9UJA3 840 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 TMED5Q9Y3A6 229 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 OR52Z1P0C646 297 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 POTEIP0CG38 1075 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 IL13P35225 146 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 MDH1P40925 334 aaKnown RBP10.76□□□□□ -0.69
SIM1-202ENST00000369208 THEM5Q8N1Q8 247 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 MASTLQ96GX5 879 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 TLK1Q9UKI8 766 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 SNX5Q9Y5X3 404 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 DPYSL4O14531 572 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 ATP6V1E1P36543 226 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 ZAP70P43403 619 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 ASPHQ12797 758 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 ALCAMQ13740 583 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 MYBPC2Q14324 1141 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 NELFBQ8WX92 580 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 GADD45BO75293 160 aaPredicted RBP10.76□□□□□ -0.69
SIM1-202ENST00000369208 DDIT3P35638 169 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 PTK2Q05397 1052 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 SPARCL1Q14515 664 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 PLEKHM2Q8IWE5 1019 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 ANKRD42Q8N9B4 389 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 SYT2Q8N9I0 419 aaPredicted RBP10.76□□□□□ -0.69
SIM1-202ENST00000369208 PI4KBQ9UBF8 816 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 DIS3Q9Y2L1 958 aaKnown RBP10.76□□□□□ -0.69
SIM1-202ENST00000369208 ADGRA3Q8IWK6 1321 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 ANO9A1A5B4 782 aa10.76□□□□□ -0.69
SIM1-202ENST00000369208 LSP1P33241 339 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms