RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 JCADQ9P266 1359 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 HSPA6P17066 643 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 CORO7P57737 925 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 LLGL1Q15334 1064 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 NBPF20Q3BBV1 942 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 CAPN12Q6ZSI9 719 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 POLD4Q9HCU8 107 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 TTLL3Q9Y4R7 772 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 NCOA3Q9Y6Q9 1424 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 K7ERI5 159 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 CTIFO43310 598 aaKnown RBP14.29□□□□□ -0.12
PTPRK-204ENST00000368210 PLTPP55058 493 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 RNF169Q8NCN4 708 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 ANKRD36BP1Q96IX9 119 aa14.29□□□□□ -0.12
PTPRK-204ENST00000368210 TTC36A6NLP5 189 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 I3L4J1 428 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 MRPS9P82933 396 aaKnown RBP14.28□□□□□ -0.12
PTPRK-204ENST00000368210 KNOP1Q1ED39 458 aaKnown RBP14.28□□□□□ -0.12
PTPRK-204ENST00000368210 MAP3K21Q5TCX8 1036 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 USP49Q70CQ1 688 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 RMDN2Q96LZ7 410 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 NUF2Q9BZD4 464 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 TUBE1Q9UJT0 475 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 CAPN9O14815 690 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 STMN1P16949 149 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 LMNB2Q03252 620 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 MYO1EQ12965 1108 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 PADI6Q6TGC4 694 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 CCDC13Q8IYE1 715 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 EXOC8Q8IYI6 725 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 RIOK1Q9BRS2 568 aaKnown RBP14.28□□□□□ -0.12
PTPRK-204ENST00000368210 TRIM9Q9C026 710 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 AKT3Q9Y243 479 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 ZNF233A6NK53 670 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 JAK3P52333 1124 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPRK-204ENST00000368210 SGO2Q562F6 1265 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 MRPL47Q9HD33 250 aaKnown RBP14.28□□□□□ -0.12
PTPRK-204ENST00000368210 ABCB6Q9NP58 842 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 DNAJC12Q9UKB3 198 aa14.28□□□□□ -0.12
PTPRK-204ENST00000368210 FCER1AP12319 257 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 TRIM50Q86XT4 487 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 DYDC2Q96IM9 177 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 TBC1D22BQ9NU19 505 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 ZNF543Q08ER8 600 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 PDIA5Q14554 519 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 ANKRD20A3Q5VUR7 823 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 TTBK2Q6IQ55 1244 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 PPP1R2P3Q6NXS1 205 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 MAP7D3Q8IWC1 876 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 RAVER2Q9HCJ3 691 aaKnown RBP14.27□□□□□ -0.12
PTPRK-204ENST00000368210 HERC5Q9UII4 1024 aaKnown RBP14.27□□□□□ -0.12
PTPRK-204ENST00000368210 ATP8A1Q9Y2Q0 1164 aa14.27□□□□□ -0.12
PTPRK-204ENST00000368210 A0A1W2PQC6 194 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 WDR64B1ANS9 1081 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 OSBPP22059 807 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 STAT3P40763 770 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 BARGINQ6ZT62 677 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 SCINQ9Y6U3 715 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 MEGF6O75095 1541 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 ANO9A1A5B4 782 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 NAA30Q147X3 362 aaPredicted RBP14.27□□□□□ -0.13
PTPRK-204ENST00000368210 XXYLT1Q8NBI6 393 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 ATP2A3Q93084 1043 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 MED10Q9BTT4 135 aa14.27□□□□□ -0.13
PTPRK-204ENST00000368210 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
PTPRK-204ENST00000368210 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.13
PTPRK-204ENST00000368210 SLC7A5Q01650 507 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 FMR1Q06787 632 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 GEN1Q17RS7 908 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 NAALADL2Q58DX5 795 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 ACBD5Q5T8D3 534 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 NAIF1Q69YI7 327 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 SESTD1Q86VW0 696 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 TAB3Q8N5C8 712 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 ABCB11O95342 1321 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 GRAMD4Q6IC98 578 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 GOLGA8SH3BPF8 625 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 TLR3O15455 904 aaKnown RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 ECEL1O95672 775 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 RASA1P20936 1047 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 DHX9Q08211 1270 aaKnown RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 ALS2CLQ60I27 953 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 RHOT2Q8IXI1 618 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 PRPF38AQ8NAV1 312 aaKnown RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 MCPH1Q8NEM0 835 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 NEK9Q8TD19 979 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 NACA2Q9H009 215 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 SNUPNO95149 360 aaKnown RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 ST13P4Q8IZP2 240 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 KCNF1Q9H3M0 494 aa14.26□□□□□ -0.13
PTPRK-204ENST00000368210 ZNF277Q9NRM2 450 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-204ENST00000368210 IPO5O00410 1097 aaKnown RBP14.25□□□□□ -0.13
PTPRK-204ENST00000368210 TPD52P55327 224 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-204ENST00000368210 DRP2Q13474 957 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 SNX1Q13596 522 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 ARMCX6Q7L4S7 300 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 NSMCE1Q8WV22 266 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 SEL1LQ9UBV2 794 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms