RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 ENPP3O14638 875 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 GPR32O75388 356 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 TRAPPC10P48553 1259 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 NFX1Q12986 1120 aaKnown RBP26.81■■□□□ 1.88
PFDN2-201ENST00000368010 TMEM266Q2M3C6 531 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 TTC38Q5R3I4 469 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 PLA2G4FQ68DD2 849 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 FAM43BQ6ZT52 329 aaPredicted RBP26.81■■□□□ 1.88
PFDN2-201ENST00000368010 C4orf19Q8IY42 314 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 TMEM40Q8WWA1 233 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 DYDC2Q96IM9 177 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 YME1L1Q96TA2 773 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 SH2D3AQ9BRG2 576 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 TMEM60Q9H2L4 133 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 ZSWIM4Q9H7M6 989 aa26.81■■□□□ 1.88
PFDN2-201ENST00000368010 WRAP73Q9P2S5 460 aaPredicted RBP26.81■■□□□ 1.88
PFDN2-201ENST00000368010 NOC2LQ9Y3T9 749 aaKnown RBP26.81■■□□□ 1.88
PFDN2-201ENST00000368010 U2AF2P26368 475 aaKnown RBP eCLIP26.8■■□□□ 1.88
PFDN2-201ENST00000368010 GJB2P29033 226 aa26.8■■□□□ 1.88
PFDN2-201ENST00000368010 NLRP11P59045 1033 aaKnown RBP26.8■■□□□ 1.88
PFDN2-201ENST00000368010 CYP4A11Q02928 519 aa26.8■■□□□ 1.88
PFDN2-201ENST00000368010 LINC01599Q8WXQ3 324 aa26.8■■□□□ 1.88
PFDN2-201ENST00000368010 ARNTL2Q8WYA1 636 aa26.8■■□□□ 1.88
PFDN2-201ENST00000368010 CEP89Q96ST8 783 aa26.8■■□□□ 1.88
PFDN2-201ENST00000368010 JPH2Q9BR39 696 aaPredicted RBP26.8■■□□□ 1.88
PFDN2-201ENST00000368010 ERVK-5Q9HDB9 667 aa26.8■■□□□ 1.88
PFDN2-201ENST00000368010 CYP26B1Q9NR63 512 aa26.8■■□□□ 1.88
PFDN2-201ENST00000368010 SMC3Q9UQE7 1217 aa26.8■■□□□ 1.88
PFDN2-201ENST00000368010 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.8■■□□□ 1.88
PFDN2-201ENST00000368010 CDH23Q9H251 3354 aa26.79■■□□□ 1.88
PFDN2-201ENST00000368010 EVPLQ92817 2033 aa26.79■■□□□ 1.88
PFDN2-201ENST00000368010 LINC01553A4QN01 128 aa26.79■■□□□ 1.88
PFDN2-201ENST00000368010 GPR182O15218 404 aa26.79■■□□□ 1.88
PFDN2-201ENST00000368010 DNM2P50570 870 aa26.79■■□□□ 1.88
PFDN2-201ENST00000368010 ADGRE1Q14246 886 aa26.79■■□□□ 1.88
PFDN2-201ENST00000368010 CTTNQ14247 550 aaKnown RBP26.79■■□□□ 1.88
PFDN2-201ENST00000368010 ZNF174Q15697 407 aa26.79■■□□□ 1.88
PFDN2-201ENST00000368010 NEK9Q8TD19 979 aa26.79■■□□□ 1.88
PFDN2-201ENST00000368010 SP7Q8TDD2 431 aaPredicted RBP26.79■■□□□ 1.88
PFDN2-201ENST00000368010 EIF2AK1Q9BQI3 630 aaKnown RBP26.79■■□□□ 1.88
PFDN2-201ENST00000368010 PPME1Q9Y570 386 aa26.79■■□□□ 1.88
PFDN2-201ENST00000368010 IGKV6-21A0A0C4DH24 114 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 MAFO75444 373 aaPredicted RBP26.78■■□□□ 1.88
PFDN2-201ENST00000368010 OR52Z1P0C646 297 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 IGFBP4P22692 258 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 YWHABP31946 246 aaKnown RBP26.78■■□□□ 1.88
PFDN2-201ENST00000368010 OTUD6AQ7L8S5 288 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 TPH2Q8IWU9 490 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 CEP170P1Q96L14 293 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 SCLT1Q96NL6 688 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 TGS1Q96RS0 853 aaKnown RBP26.78■■□□□ 1.88
PFDN2-201ENST00000368010 ADAMTS10Q9H324 1103 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 TMX1Q9H3N1 280 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 ST3GAL5Q9UNP4 418 aa26.78■■□□□ 1.88
PFDN2-201ENST00000368010 SLITRK3O94933 977 aa26.77■■□□□ 1.88
PFDN2-201ENST00000368010 GPC3P51654 580 aa26.77■■□□□ 1.88
PFDN2-201ENST00000368010 NPEPPSP55786 919 aa26.77■■□□□ 1.88
PFDN2-201ENST00000368010 DRP2Q13474 957 aa26.77■■□□□ 1.88
PFDN2-201ENST00000368010 SPRED2Q7Z698 418 aa26.77■■□□□ 1.88
PFDN2-201ENST00000368010 RTN4RL1Q86UN2 441 aaPredicted RBP26.77■■□□□ 1.88
PFDN2-201ENST00000368010 FAM228AQ86W67 206 aa26.77■■□□□ 1.88
PFDN2-201ENST00000368010 SLC7A3Q8WY07 619 aa26.77■■□□□ 1.88
PFDN2-201ENST00000368010 HSD17B14Q9BPX1 270 aa26.77■■□□□ 1.88
PFDN2-201ENST00000368010 TSPYL2Q9H2G4 693 aaPredicted RBP26.77■■□□□ 1.88
PFDN2-201ENST00000368010 POTEMA6NI47 508 aa26.76■■□□□ 1.87
PFDN2-201ENST00000368010 H3BQV1 296 aa26.76■■□□□ 1.87
PFDN2-201ENST00000368010 CDC42EP1Q00587 391 aa26.76■■□□□ 1.87
PFDN2-201ENST00000368010 EXOC8Q8IYI6 725 aa26.76■■□□□ 1.87
PFDN2-201ENST00000368010 CHD9Q3L8U1 2897 aa26.76■■□□□ 1.87
PFDN2-201ENST00000368010 COL4A6Q14031 1691 aa26.76■■□□□ 1.87
PFDN2-201ENST00000368010 RFXAPO00287 272 aa26.75■■□□□ 1.87
PFDN2-201ENST00000368010 EIF4BP23588 611 aaKnown RBP26.75■■□□□ 1.87
PFDN2-201ENST00000368010 RFC5P40937 340 aa26.75■■□□□ 1.87
PFDN2-201ENST00000368010 POLGP54098 1239 aaPredicted RBP26.75■■□□□ 1.87
PFDN2-201ENST00000368010 ERVK-21P61565 698 aa26.75■■□□□ 1.87
PFDN2-201ENST00000368010 MCTP1Q6DN14 999 aa26.75■■□□□ 1.87
PFDN2-201ENST00000368010 NLRP7Q8WX94 980 aa26.75■■□□□ 1.87
PFDN2-201ENST00000368010 ZNF668Q96K58 619 aaPredicted RBP26.75■■□□□ 1.87
PFDN2-201ENST00000368010 SUCLA2Q9P2R7 463 aaPredicted RBP26.75■■□□□ 1.87
PFDN2-201ENST00000368010 MTUS1Q9ULD2 1270 aa26.75■■□□□ 1.87
PFDN2-201ENST00000368010 DENND3A2RUS2 1198 aa26.74■■□□□ 1.87
PFDN2-201ENST00000368010 EPOPA6NHQ4 379 aa26.74■■□□□ 1.87
PFDN2-201ENST00000368010 LYPLA2O95372 231 aa26.74■■□□□ 1.87
PFDN2-201ENST00000368010 NBR1Q14596 966 aa26.74■■□□□ 1.87
PFDN2-201ENST00000368010 XKR9Q5GH70 373 aa26.74■■□□□ 1.87
PFDN2-201ENST00000368010 NPAS4Q8IUM7 802 aa26.74■■□□□ 1.87
PFDN2-201ENST00000368010 ZNF579Q8NAF0 562 aaKnown RBP26.74■■□□□ 1.87
PFDN2-201ENST00000368010 C1orf112Q9NSG2 853 aa26.74■■□□□ 1.87
PFDN2-201ENST00000368010 LOXHD1Q8IVV2 1947 aa26.74■■□□□ 1.87
PFDN2-201ENST00000368010 STAG3L1P0CL83 205 aa26.73■■□□□ 1.87
PFDN2-201ENST00000368010 DARSP14868 501 aaKnown RBP26.73■■□□□ 1.87
PFDN2-201ENST00000368010 TECP42680 631 aa26.73■■□□□ 1.87
PFDN2-201ENST00000368010 SAMD11Q96NU1 681 aa26.73■■□□□ 1.87
PFDN2-201ENST00000368010 ADAM2Q99965 735 aa26.73■■□□□ 1.87
PFDN2-201ENST00000368010 DHX33Q9H6R0 707 aaKnown RBP26.73■■□□□ 1.87
PFDN2-201ENST00000368010 ADGRA3Q8IWK6 1321 aa26.72■■□□□ 1.87
PFDN2-201ENST00000368010 GTPBP6O43824 516 aaPredicted RBP26.72■■□□□ 1.87
PFDN2-201ENST00000368010 MGEA5O60502 916 aa26.72■■□□□ 1.87
PFDN2-201ENST00000368010 TOB1P50616 345 aaPredicted RBP26.72■■□□□ 1.87
PFDN2-201ENST00000368010 CUL4AQ13619 759 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms