RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RGS18Q9NS28 235 aa15.43■□□□□ 0.06
TNFRSF1A-202ENST00000366159 NRBP2Q9NSY0 501 aa15.43■□□□□ 0.06
TNFRSF1A-202ENST00000366159 ST3GAL5Q9UNP4 418 aa15.43■□□□□ 0.06
TNFRSF1A-202ENST00000366159 RWDD3Q9Y3V2 267 aa15.43■□□□□ 0.06
TNFRSF1A-202ENST00000366159 BRWD1Q9NSI6 2320 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 ATG2AQ2TAZ0 1938 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 C9IYK1 514 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 GPR182O15218 404 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 CHMP2AO43633 222 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 VTNP04004 478 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 SARSP49591 514 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 CLCN3P51790 818 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 FAM189BP81408 668 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 BTG3Q14201 252 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 DSC3Q14574 896 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 PTPROQ16827 1216 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 EARS2Q5JPH6 523 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 EFCAB12Q6NXP0 572 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 TRMT1LQ7Z2T5 733 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 FAM228AQ86W67 206 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 CMTR2Q8IYT2 770 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 METTL13Q8N6R0 699 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 TNFRSF25Q93038 417 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 GTF3C6Q969F1 213 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 UHRF1Q96T88 793 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 OSMRQ99650 979 aa15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 DDX25Q9UHL0 483 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-202ENST00000366159 TCF20Q9UGU0 1960 aaKnown RBP15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 IGKV6-21A0A0C4DH24 114 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 STAG3L1P0CL83 205 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 NFX1Q12986 1120 aaKnown RBP15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 CAMK1Q14012 370 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 MIER3Q7Z3K6 550 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 NEK8Q86SG6 692 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 ZNF710Q8N1W2 664 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 NECAB1Q8N987 351 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 HAS1Q92839 578 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 P2RX5Q93086 422 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 PLVAPQ9BX97 442 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 ORC3Q9UBD5 711 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 VAV3Q9UKW4 847 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 GINS2Q9Y248 185 aa15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 MRPL42Q9Y6G3 142 aaKnown RBP15.41■□□□□ 0.06
TNFRSF1A-202ENST00000366159 KIAA1671Q9BY89 1806 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 EML1O00423 815 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 GRM6O15303 877 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 GCFC2P16383 781 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 XBP1P17861 261 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 CTNNB1P35222 781 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 NLRP11P59045 1033 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 ST3GAL1Q11201 340 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 PPP2R5CQ13362 524 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 LETM2Q2VYF4 491 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 XKR3Q5GH77 459 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 ODR4Q5SWX8 454 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 SLC24A5Q71RS6 500 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 LRRC71Q8N4P6 559 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 BANK1Q8NDB2 785 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 NSUN7Q8NE18 718 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 FAM20AQ96MK3 541 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 NECAB3Q96P71 396 aaPredicted RBP15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 PPP1R16BQ96T49 567 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 ADAM2Q99965 735 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 C11orf84Q9BUA3 381 aaPredicted RBP15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 LMAN2LQ9H0V9 348 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 UBE2ZQ9H832 354 aaPredicted RBP15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 C1orf112Q9NSG2 853 aa15.4■□□□□ 0.06
TNFRSF1A-202ENST00000366159 FNDC1Q4ZHG4 1894 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 CCDC194A0A1B0GVG4 234 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TMEM150BA6NC51 233 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TBX3O15119 743 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 EIF5BO60841 1220 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 EIF4BP23588 611 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TMOD1P28289 359 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 GATMP50440 423 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 GPC3P51654 580 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 NEK4P51957 841 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 DRP2Q13474 957 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 LEXMQ3ZCV2 418 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TIGD5Q53EQ6 642 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 NAALADL2Q58DX5 795 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TCEAL5Q5H9L2 206 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 PIK3AP1Q6ZUJ8 805 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 ANO5Q75V66 913 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 NEK9Q8TD19 979 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 WASF1Q92558 559 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 ELAC1Q9H777 363 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 PLAGL2Q9UPG8 496 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 AKT3Q9Y243 479 aa15.39■□□□□ 0.05
TNFRSF1A-202ENST00000366159 FAM205CA6NFA0 338 aa15.38■□□□□ 0.05
TNFRSF1A-202ENST00000366159 SPIRE1Q08AE8 756 aa15.38■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TBC1D8BQ0IIM8 1120 aa15.38■□□□□ 0.05
TNFRSF1A-202ENST00000366159 NR5A1Q13285 461 aa15.38■□□□□ 0.05
TNFRSF1A-202ENST00000366159 IL27Q8NEV9 243 aa15.38■□□□□ 0.05
TNFRSF1A-202ENST00000366159 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-202ENST00000366159 MAP7D2Q96T17 732 aa15.38■□□□□ 0.05
TNFRSF1A-202ENST00000366159 NSUN3Q9H649 340 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1A-202ENST00000366159 PCDHB7Q9Y5E2 793 aa15.38■□□□□ 0.05
TNFRSF1A-202ENST00000366159 DENND3A2RUS2 1198 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 MAFO75444 373 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms