RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CDCA7Q9BWT1 371 aaPredicted RBP14.98□□□□□ -0.01
SMC5-201ENST00000361138 MRPL11Q9Y3B7 192 aaKnown RBP14.98□□□□□ -0.01
SMC5-201ENST00000361138 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
SMC5-201ENST00000361138 FAM205CA6NFA0 338 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 H0YCG3 227 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 NMT2O60551 498 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 RHOBTB3O94955 611 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 CPP00450 1065 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 GOLGA8QA0A0J9YX86 632 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 GOLGA8OA6NCC3 632 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 GOLGA8NF8WBI6 632 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 P4HA1P13674 534 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 DYNLT1P63172 113 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 BASP1P80723 227 aaKnown RBP14.98□□□□□ -0.01
SMC5-201ENST00000361138 GRAMD1BQ3KR37 738 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 TMCO4Q5TGY1 634 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 ADGRB2O60241 1585 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 MCF2LO15068 1137 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 C1orf146Q5VVC0 180 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 PAPD7Q5XG87 772 aaKnown RBP14.97□□□□□ -0.01
SMC5-201ENST00000361138 NSMFQ6X4W1 530 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 DNAJC7Q99615 494 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 AMNQ9BXJ7 453 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 PCDHA6Q9UN73 950 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 PCDHA8Q9Y5H6 950 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 SCP2P22307 547 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 SLC16A2P36021 539 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 NT5C2P49902 561 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 MYCBPAPQ8TBZ2 947 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 DTNBP1Q96EV8 351 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 NACC1Q96RE7 527 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 TRIM51Q9BSJ1 452 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 GINM1Q9NU53 330 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 A0A0G2JLW4 131 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 PNMA6FA0A0J9YX94 578 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 PDE1BQ01064 536 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 FOXR1Q6PIV2 292 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 CRLF3Q8IUI8 442 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 SERPINI1Q99574 410 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 HPSEQ9Y251 543 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 CAMSAP1Q5T5Y3 1602 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 PTPAQ15257 358 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 LONP2Q86WA8 852 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
SMC5-201ENST00000361138 RFFLQ8WZ73 363 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 SGSM3Q96HU1 749 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 WNT8AQ9H1J5 351 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 ANLNQ9NQW6 1124 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 PPARGC1AQ9UBK2 798 aaKnown RBP14.97□□□□□ -0.01
SMC5-201ENST00000361138 NAB2Q15742 525 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 KIAA1755Q5JYT7 1200 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 TTC17Q96AE7 1141 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 ZNF577Q9BSK1 485 aa14.97□□□□□ -0.01
SMC5-201ENST00000361138 PITPNM2Q9BZ72 1349 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 NCF2P19878 526 aaPredicted RBP14.96□□□□□ -0.01
SMC5-201ENST00000361138 MXI1P50539 228 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 GRM4Q14833 912 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 USP38Q8NB14 1042 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 CEP70Q8NHQ1 597 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 MORC4Q8TE76 937 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 PDE6BP35913 854 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 SCARF1Q14162 830 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 CERKLQ49MI3 558 aaPredicted RBP14.96□□□□□ -0.01
SMC5-201ENST00000361138 USP49Q70CQ1 688 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 NLRX1Q86UT6 975 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 AGGF1Q8N302 714 aaeCLIP14.96□□□□□ -0.01
SMC5-201ENST00000361138 CHURC1Q8WUH1 139 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 CASKIN2Q8WXE0 1202 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 RNF34Q969K3 372 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 BARHL2Q9NY43 387 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 HSD17B3P37058 310 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 ST3GAL1Q11201 340 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 TMEM154Q6P9G4 183 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 RGS9BPQ6ZS82 235 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 SFR1Q86XK3 245 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 DCTN4Q9UJW0 460 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 ASAP1Q9ULH1 1129 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 PPRC1Q5VV67 1664 aaKnown RBP14.96□□□□□ -0.01
SMC5-201ENST00000361138 PTPRMP28827 1452 aa14.96□□□□□ -0.01
SMC5-201ENST00000361138 ERBB3P21860 1342 aa14.96□□□□□ -0.02
SMC5-201ENST00000361138 GTF2IP78347 998 aa14.96□□□□□ -0.02
SMC5-201ENST00000361138 ZBTB17Q13105 803 aa14.96□□□□□ -0.02
SMC5-201ENST00000361138 NDE1Q9NXR1 346 aa14.96□□□□□ -0.02
SMC5-201ENST00000361138 SEPT10Q9P0V9 454 aa14.96□□□□□ -0.02
SMC5-201ENST00000361138 GRIN1Q05586 938 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 KNOP1Q1ED39 458 aaKnown RBP14.95□□□□□ -0.02
SMC5-201ENST00000361138 BBS9Q3SYG4 887 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 ARL8AQ96BM9 186 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 NUP85Q9BW27 656 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 PFDN4Q9NQP4 134 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 TJP3O95049 919 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 IL6STP40189 918 aaPredicted RBP14.95□□□□□ -0.02
SMC5-201ENST00000361138 SCTRP47872 440 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 ARFIP2P53365 341 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 ZNF564Q8TBZ8 553 aaPredicted RBP14.95□□□□□ -0.02
SMC5-201ENST00000361138 FAM161BQ96MY7 647 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 C7orf25Q9BPX7 421 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 USP32Q8NFA0 1604 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 E9PMD0 336 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 CD44P16070 742 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms