RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 PIM2Q9P1W9 311 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 NARFQ9UHQ1 456 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 ZNF711Q9Y462 761 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 MFAP3LO75121 409 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 GH2P01242 217 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 ASNSP08243 561 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 ARL4AP40617 200 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 C16orf87Q6PH81 154 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 NEK9Q8TD19 979 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 HEXIM2Q96MH2 286 aaKnown RBP13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 UBN1Q9NPG3 1134 aa13.1□□□□□ -0.31
CCDC144A-204ENST00000360524 FGGP02679 453 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 XPAP23025 273 aaPredicted RBP13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 RPF1Q9H9Y2 349 aaKnown RBP13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 KRT82Q9NSB4 513 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 TET3O43151 1660 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 MYO3BQ8WXR4 1341 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 EEF1B2P24534 225 aaKnown RBP13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 MARK3P27448 753 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 ART3Q13508 389 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 TRMT10CQ7L0Y3 403 aaKnown RBP13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 COL15A1P39059 1388 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 ADCY10Q96PN6 1610 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 GRAMD1BQ3KR37 738 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 PPP4R3CPQ6ZMV5 832 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 SRLQ86TD4 932 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 RMDN2Q96LZ7 410 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 CHGBP05060 677 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 JAK3P52333 1124 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 HABP4Q5JVS0 413 aaKnown RBP13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 NUDCD3Q8IVD9 361 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 CDC26Q8NHZ8 85 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 LRRC4Q9HBW1 653 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 TLK1Q9UKI8 766 aa13.09□□□□□ -0.31
CCDC144A-204ENST00000360524 F5H423 210 aaPredicted RBP13.08□□□□□ -0.31
CCDC144A-204ENST00000360524 KITP10721 976 aa13.08□□□□□ -0.31
CCDC144A-204ENST00000360524 LRRC63Q05C16 580 aa13.08□□□□□ -0.31
CCDC144A-204ENST00000360524 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.31
CCDC144A-204ENST00000360524 PCGF5Q86SE9 256 aa13.08□□□□□ -0.31
CCDC144A-204ENST00000360524 TRIM42Q8IWZ5 723 aa13.08□□□□□ -0.31
CCDC144A-204ENST00000360524 FGD4Q96M96 766 aa13.08□□□□□ -0.31
CCDC144A-204ENST00000360524 MSTO1Q9BUK6 570 aa13.08□□□□□ -0.31
CCDC144A-204ENST00000360524 PLA2R1Q13018 1463 aa13.08□□□□□ -0.31
CCDC144A-204ENST00000360524 GOLGA8MH3BSY2 632 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 ESRRAP11474 423 aaPredicted RBP13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 NAA30Q147X3 362 aaPredicted RBP13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 RESP18Q5W5W9 173 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 KIAA1841Q6NSI8 718 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 PRKAG2Q9UGJ0 569 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 MINPP1Q9UNW1 487 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 PRPSAP2O60256 369 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 SRGAP2CP0DJJ0 459 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 KRT10P13645 584 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 ZNF18P17022 549 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 SLFN12LQ6IEE8 588 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 SIX6OS1Q8N1H7 587 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 USP6NLQ92738 828 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 ORC6Q9Y5N6 252 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 CYP2D6P10635 497 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 PARD3BQ8TEW8 1205 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 KLC4Q9NSK0 619 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 ADAMTS1Q9UHI8 967 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 ABT1Q9ULW3 272 aaKnown RBP13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 PACSIN2Q9UNF0 486 aaPredicted RBP13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 A0A0G2JND7 137 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 USP17L5A8MUK1 530 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 CDHR2Q9BYE9 1310 aa13.08□□□□□ -0.32
CCDC144A-204ENST00000360524 NCK2O43639 380 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 ECE2O60344 883 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 MAN1A2O60476 641 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 ZFXP17010 805 aaPredicted RBP13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 ANXA13P27216 316 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 GGCXP38435 758 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 NUGGCQ68CJ6 796 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 HEMGNQ9BXL5 484 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 OLA1Q9NTK5 396 aaKnown RBP13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 NEDD4P46934 1319 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 CCDC195A0A1B0GUA6 201 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 ZBTB5O15062 677 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 CACNB3P54284 484 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 PASD1Q8IV76 773 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 PYROXD1Q8WU10 500 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 POLD4Q9HCU8 107 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 PALMDQ9NP74 551 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 SAYSD1Q9NPB0 183 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 FEM1BQ9UK73 627 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 CPSF3Q9UKF6 684 aaKnown RBP13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 MAPK13O15264 365 aa13.07□□□□□ -0.32
CCDC144A-204ENST00000360524 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms