RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 KIAA1755Q5JYT7 1200 aa12.15□□□□□ -0.46
TMC3-201ENST00000359440 KCTD1Q719H9 257 aa12.15□□□□□ -0.46
TMC3-201ENST00000359440 TTC13Q8NBP0 860 aa12.15□□□□□ -0.46
TMC3-201ENST00000359440 ANKS1AQ92625 1134 aa12.15□□□□□ -0.46
TMC3-201ENST00000359440 RNPC3Q96LT9 517 aaKnown RBP12.15□□□□□ -0.46
TMC3-201ENST00000359440 TRIM55Q9BYV6 548 aa12.15□□□□□ -0.46
TMC3-201ENST00000359440 SSX2IPQ9Y2D8 614 aa12.15□□□□□ -0.46
TMC3-201ENST00000359440 PITPNM2Q9BZ72 1349 aa12.15□□□□□ -0.46
TMC3-201ENST00000359440 OPHN1O60890 802 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 TJP3O95049 919 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 ZWINTO95229 277 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 BAG2O95816 211 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 TOB1P50616 345 aaPredicted RBP12.15□□□□□ -0.47
TMC3-201ENST00000359440 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.47
TMC3-201ENST00000359440 TROAPQ12815 778 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 KRT81Q14533 505 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 DLGAP5Q15398 846 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 ATG16L1Q676U5 607 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 CASC4Q6P4E1 433 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 RNF207Q6ZRF8 634 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 FAM160B2Q86V87 743 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 XXYLT1Q8NBI6 393 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 SH3RF3Q8TEJ3 882 aaPredicted RBP12.15□□□□□ -0.47
TMC3-201ENST00000359440 XPO6Q96QU8 1125 aaKnown RBP12.15□□□□□ -0.47
TMC3-201ENST00000359440 KIAA1586Q9HCI6 787 aa12.15□□□□□ -0.47
TMC3-201ENST00000359440 SUCLA2Q9P2R7 463 aaPredicted RBP12.15□□□□□ -0.47
TMC3-201ENST00000359440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 MEIS1O00470 390 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 TBX3O15119 743 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 RPS6KA5O75582 802 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 MYBL1P10243 752 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 ESRRAP11474 423 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 SESN3P58005 492 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 YWHAGP61981 247 aaKnown RBP eCLIP12.14□□□□□ -0.47
TMC3-201ENST00000359440 SNX1Q13596 522 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 STAT4Q14765 748 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 DRAP1Q14919 205 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 CPXCR1Q8N123 301 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 RIN2Q8WYP3 895 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 NSUN4Q96CB9 384 aaKnown RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 CYFIP2Q96F07 1278 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 PPP1R9AQ9ULJ8 1098 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 LRRC10BA6NIK2 292 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 LRRIQ3A6PVS8 624 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 BRAFP15056 766 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 PDZD4Q76G19 769 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 CDHR1Q96JP9 859 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 LRRC37BQ96QE4 947 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 PICK1Q9NRD5 415 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 AMACRQ9UHK6 382 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 PCDHB4Q9Y5E5 795 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 RASA4BC9J798 803 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 E9PMD0 336 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 MCF2LO15068 1137 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 RASA4O43374 803 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 NMT2O60551 498 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 GRIN1Q05586 938 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 TMEM179Q6ZVK1 233 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 EPM2AIP1Q7L775 607 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 ZNF34Q8IZ26 560 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 SH2D3CQ8N5H7 860 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 SGSM3Q96HU1 749 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 FAM84BQ96KN1 310 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 STK33Q9BYT3 514 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 CXorf56Q9H5V9 222 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 SUGCTQ9HAC7 445 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 KMT5AQ9NQR1 393 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 NWD1Q149M9 1564 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 PABPN1LA6NDY0 278 aaKnown RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 USP17L5A8MUK1 530 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 KRT1P04264 644 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 ELF1P32519 619 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 KLHL38Q2WGJ6 581 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 DNAJC24Q6P3W2 148 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 CCDC137Q6PK04 289 aaKnown RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 ILDR1Q86SU0 546 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 SNF8Q96H20 258 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 SEC16BQ96JE7 1060 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 CSRNP1Q96S65 589 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 COA1Q9GZY4 146 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 KBTBD4Q9NVX7 518 aa12.14□□□□□ -0.47
TMC3-201ENST00000359440 PPP1R1BQ9UD71 204 aaPredicted RBP12.14□□□□□ -0.47
TMC3-201ENST00000359440 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
TMC3-201ENST00000359440 HNRNPH1P31943 449 aaKnown RBP12.13□□□□□ -0.47
TMC3-201ENST00000359440 SLC16A2P36021 539 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 SURF1Q15526 300 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 ARHGEF16Q5VV41 709 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 TTI2Q6NXR4 508 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 TSC22D3Q99576 134 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 FRMD3A2A2Y4 597 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 CARSP49589 748 aaKnown RBP12.13□□□□□ -0.47
TMC3-201ENST00000359440 STAT2P52630 851 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 KAZNQ674X7 775 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 SYNE4Q8N205 404 aa12.13□□□□□ -0.47
TMC3-201ENST00000359440 EIF1ADQ8N9N8 165 aaKnown RBP12.13□□□□□ -0.47
TMC3-201ENST00000359440 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms