RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 CPA4Q9UI42 421 aa13.19□□□□□ -0.3
SYN3-202ENST00000358763 IGF2BP3O00425 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
SYN3-202ENST00000358763 CALUO43852 315 aaPredicted RBP13.18□□□□□ -0.3
SYN3-202ENST00000358763 DKC1O60832 514 aaKnown RBP eCLIP13.18□□□□□ -0.34e-7■■■■■ 32.2
SYN3-202ENST00000358763 NR3C1P04150 777 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 PLS3P13797 630 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 FKBP15Q5T1M5 1219 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 ARMCX2Q7L311 632 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 CCDC112Q8NEF3 446 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 DDX41Q9UJV9 622 aaKnown RBP13.18□□□□□ -0.3
SYN3-202ENST00000358763 A0A1W2PQC6 194 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 ATG7O95352 703 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 TPM1P09493 284 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 CASP4P49662 377 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 DNTTIP2Q5QJE6 756 aaKnown RBP13.18□□□□□ -0.3
SYN3-202ENST00000358763 ZC3H3Q8IXZ2 948 aaKnown RBP13.18□□□□□ -0.3
SYN3-202ENST00000358763 DRC1Q96MC2 740 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 PCYT2Q99447 389 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 KIFC3Q9BVG8 833 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 PLXNA1Q9UIW2 1896 aa13.18□□□□□ -0.3
SYN3-202ENST00000358763 SLC16A4O15374 487 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 TGFB3P10600 412 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 TCF7P36402 384 aaPredicted RBP13.17□□□□□ -0.3
SYN3-202ENST00000358763 METTL7BQ6UX53 244 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 STXBP4Q6ZWJ1 553 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 SAPCD2Q86UD0 394 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 CYP26B1Q9NR63 512 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 PCDHB13Q9Y5F0 798 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 TTC26A0AVF1 554 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 PPP1R37O75864 691 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 AKAP3O75969 853 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 ZNF792Q3KQV3 632 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 HSDL1Q3SXM5 330 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 XKR3Q5GH77 459 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 GJC2Q5T442 439 aaPredicted RBP13.17□□□□□ -0.3
SYN3-202ENST00000358763 E4F1Q66K89 784 aaPredicted RBP13.17□□□□□ -0.3
SYN3-202ENST00000358763 TRIM50Q86XT4 487 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 SYCP3Q8IZU3 236 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 MAFBQ9Y5Q3 323 aaPredicted RBP13.17□□□□□ -0.3
SYN3-202ENST00000358763 CCDC169A6NNP5 214 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 TISP43B9A030 160 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 OATP04181 439 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
SYN3-202ENST00000358763 FAM110CQ1W6H9 321 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 CNGA4Q8IV77 575 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 TRIM59Q8IWR1 403 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 BSNDQ8WZ55 320 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 C16orf45Q96MC5 204 aaPredicted RBP13.17□□□□□ -0.3
SYN3-202ENST00000358763 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
SYN3-202ENST00000358763 UBE4BO95155 1302 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 ASB14A6NK59 587 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 RASSF10A6NK89 507 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 GNA14O95837 355 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 TXNP10599 105 aaKnown RBP13.16□□□□□ -0.3
SYN3-202ENST00000358763 MARK3P27448 753 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 KRT9P35527 623 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 CYP2J2P51589 502 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 TRIM14Q14142 442 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 PANX2Q96RD6 677 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 STRA6Q9BX79 667 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 GBP3Q9H0R5 595 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
SYN3-202ENST00000358763 SOWAHDA6NJG2 315 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 NOP56O00567 594 aaKnown RBP13.16□□□□□ -0.3
SYN3-202ENST00000358763 MTF1Q14872 753 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 CELF3Q5SZQ8 465 aaKnown RBP13.16□□□□□ -0.3
SYN3-202ENST00000358763 RGMBQ6NW40 437 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 HS2ST1Q7LGA3 356 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 DHX37Q8IY37 1157 aaKnown RBP13.16□□□□□ -0.3
SYN3-202ENST00000358763 CCAR2Q8N163 923 aaKnown RBP13.16□□□□□ -0.3
SYN3-202ENST00000358763 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 SEPT1Q8WYJ6 367 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 ERGIC2Q96RQ1 377 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 TIPINQ9BVW5 301 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 FAM207AQ9NSI2 230 aaPredicted RBP13.16□□□□□ -0.3
SYN3-202ENST00000358763 ABHD10Q9NUJ1 306 aa13.16□□□□□ -0.3
SYN3-202ENST00000358763 IGKV6D-21A0A0A0MT36 114 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 STAT5BP51692 787 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 POLGP54098 1239 aaPredicted RBP13.15□□□□□ -0.3
SYN3-202ENST00000358763 TAF1CQ15572 869 aaPredicted RBP13.15□□□□□ -0.3
SYN3-202ENST00000358763 DCAF17Q5H9S7 520 aaPredicted RBP13.15□□□□□ -0.3
SYN3-202ENST00000358763 CCDC62Q6P9F0 684 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 SPATA33Q96N06 139 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 ATP6V0A4Q9HBG4 840 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 AGPAT5Q9NUQ2 364 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 EPHB6O15197 1021 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 ARHGAP6O43182 974 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 DGAT1O75907 488 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 RPL13P26373 211 aaKnown RBP13.15□□□□□ -0.3
SYN3-202ENST00000358763 NPTX2P47972 431 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 MARSP56192 900 aaKnown RBP13.15□□□□□ -0.3
SYN3-202ENST00000358763 GRM1Q13255 1194 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 GPR20Q99678 358 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.3
SYN3-202ENST00000358763 ARMCX3Q9UH62 379 aaPredicted RBP13.15□□□□□ -0.3
SYN3-202ENST00000358763 SIK3Q9Y2K2 1263 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms