RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 SYTL2Q9HCH5 934 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 TRAF3IP3Q9Y228 551 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 RGS12O14924 1447 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 NCK2O43639 380 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 PLA2G4BP0C869 781 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 PHKA1P46020 1223 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 TBL3Q12788 808 aaKnown RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 KDELC2Q7Z4H8 507 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 RBM46Q8TBY0 533 aaKnown RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 TRIM33Q9UPN9 1127 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 ATP8B3O60423 1300 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 IL13P35225 146 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 TEX2Q8IWB9 1127 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 PARP9Q8IXQ6 854 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 ENAHQ8N8S7 591 aaPredicted RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 ARHGEF1Q92888 912 aaKnown RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 LRRC37BQ96QE4 947 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 C19orf44Q9H6X5 657 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 MID2Q9UJV3 735 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 FBXO2Q9UK22 296 aaPredicted RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 ORC4O43929 436 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 ALDH18A1P54886 795 aaKnown RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 TNFAIP1Q13829 316 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 GCNAQ96QF7 691 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 MSTO1Q9BUK6 570 aa11.95□□□□□ -0.5
COL11A1-202ENST00000358392 FOXP1Q9H334 677 aaPredicted RBP11.95□□□□□ -0.5
COL11A1-202ENST00000358392 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
COL11A1-202ENST00000358392 MYO1CO00159 1063 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 WDR47O94967 919 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 CUL3Q13618 768 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 SLC39A14Q15043 492 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 ADCK1Q86TW2 530 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 C11orf74Q86VG3 221 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 PAGE5Q96GU1 130 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 EGFL8Q99944 293 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 MXI1P50539 228 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 PAPOLAP51003 745 aaKnown RBP11.94□□□□□ -0.5
COL11A1-202ENST00000358392 CUL1Q13616 776 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 KCTD2Q14681 263 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 MB21D1Q8N884 522 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 AMNQ9BXJ7 453 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 TMEM206Q9H813 350 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 DEPDC1Q5TB30 811 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 PPM1NQ8N819 430 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 EPC1Q9H2F5 836 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 UBA6A0AVT1 1052 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-202ENST00000358392 HAUS5O94927 633 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 ZNF589Q86UQ0 364 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-202ENST00000358392 FBXO18Q8NFZ0 1043 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 OR9Q1Q8NGQ5 310 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 NACC1Q96RE7 527 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 NDE1Q9NXR1 346 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 PCDHB6Q9Y5E3 794 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 DENND4BO75064 1496 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-202ENST00000358392 GPR162Q16538 588 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 MMS22LQ6ZRQ5 1243 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 VSTM4Q8IW00 320 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 PARVGQ9HBI0 331 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 GIMAP4Q9NUV9 329 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 PRR23D1E9PI22 279 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-202ENST00000358392 PRR23D2P0DMB1 279 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-202ENST00000358392 ARL4CP56559 192 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 FKBP3Q00688 224 aaKnown RBP11.94□□□□□ -0.5
COL11A1-202ENST00000358392 PLEKHM3Q6ZWE6 761 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 FLCNQ8NFG4 579 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 DTX3LQ8TDB6 740 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-202ENST00000358392 GREM2Q9H772 168 aa11.94□□□□□ -0.5
COL11A1-202ENST00000358392 TTLL1O95922 423 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 PMS2P54278 862 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 PEX3P56589 373 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 ANGPT1Q15389 498 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 AARS2Q5JTZ9 985 aaKnown RBP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 DDX42Q86XP3 938 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 TMCO5AQ8N6Q1 288 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 THAP9Q9H5L6 903 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 MAGEF1Q9HAY2 307 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 POLD4Q9HCU8 107 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 CCDC151A5D8V7 595 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 KRT37O76014 449 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 ATP1A3P13637 1013 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 NME3Q13232 169 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 CEP55Q53EZ4 464 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 SLC27A3Q5K4L6 730 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 RNF219Q5W0B1 726 aaPredicted RBP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 PATL1Q86TB9 770 aaKnown RBP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 PIGOQ8TEQ8 1089 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 PUS3Q9BZE2 481 aaKnown RBP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 ASPSCR1Q9BZE9 553 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 LSG1Q9H089 658 aaKnown RBP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 RUBCNLQ9H714 662 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 NDFIP2Q9NV92 336 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 SERPINB2P05120 415 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 PPARGP37231 505 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms