RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 KPNA2P52292 529 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 HADHQ16836 314 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 NEK10Q6ZWH5 1172 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ITFG2Q969R8 447 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 MTBPQ96DY7 904 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 NACC1Q96RE7 527 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 LRRC1Q9BTT6 524 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CYP26B1Q9NR63 512 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 DDX25Q9UHL0 483 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 F8W8V4 182 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 RPSAP08865 295 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PBX1P40424 430 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 RASGRF1Q13972 1273 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SBK1Q52WX2 424 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TATDN2Q93075 761 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TRAIPQ9BWF2 469 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ABCF2Q9UG63 623 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 MYH7BA7E2Y1 1941 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CWF19L2Q2TBE0 894 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF677Q86XU0 584 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 MAGEB18Q96M61 343 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ABCF3Q9NUQ8 709 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TBC1D23Q9NUY8 699 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SLC24A2Q9UI40 661 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ADGRB3O60242 1522 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 APOA4P06727 396 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 YARSP54577 528 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PTPN12Q05209 780 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC15Q0P6D6 951 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 AP3B2Q13367 1082 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TPCN2Q8NHX9 752 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PSTPIP2Q9H939 334 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SLC16A3O15427 465 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 MGEA5O60502 916 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CNGA3Q16281 694 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ERMARDQ5T6L9 678 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ATP6V1C1P21283 382 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 HIBADHP31937 336 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 HADHBP55084 474 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SMCO2A6NFE2 343 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 KRT38O76015 456 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TBC1D9BQ66K14 1250 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 KRT28Q7Z3Y7 464 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PDCD7Q8N8D1 485 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 EPS8L2Q9H6S3 715 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF532Q9HCE3 1301 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 KLHL33A6NCF5 533 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SLCO1B7G3V0H7 640 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PHF2O75151 1096 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 RAPGEF3O95398 923 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SERPINB3P29508 390 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 POLR2FP61218 127 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PIGHQ14442 188 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF804AQ7Z570 1209 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 RNPC3Q96LT9 517 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SNAPC5O75971 98 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 P4HA1P13674 534 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 MYL6P60660 151 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CYTH3O43739 400 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 NPTXRO95502 500 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PAF1Q8N7H5 531 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 DTX3LQ8TDB6 740 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 VPS50Q96JG6 964 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 FGD4Q96M96 766 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SNX25Q9H3E2 840 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 MAGEE1Q9HCI5 957 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 EFR3BQ9Y2G0 817 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 MAST3O60307 1309 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC160A6NGH7 325 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TCP11X1B4DZS4 312 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PALMO75781 387 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 GUCY2FP51841 1108 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 GUCY1A3Q02108 690 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PURBQ96QR8 312 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CEMIPQ8WUJ3 1361 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CAMSAP1Q5T5Y3 1602 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SASH3O75995 380 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC25Q86WR0 208 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TPH2Q8IWU9 490 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 FAM178BQ8IXR5 827 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TMEM2Q9UHN6 1383 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CDC42BPGQ6DT37 1551 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 FXR2P51116 673 aaKnown RBP eCLIP4.41□□□□□ -1.72e-6■■■■■ 27
SYNE2-204ENST00000358025 IKQ13123 557 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 KRT72Q14CN4 511 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 SGO2Q562F6 1265 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PACS2Q86VP3 889 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 C6orf203Q9P0P8 240 aaPredicted RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TACC3Q9Y6A5 838 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TMEM94Q12767 1356 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 MT-ND3P03897 115 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ACAT1P24752 427 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 NSFP46459 744 aaKnown RBP4.41□□□□□ -1.7
SYNE2-204ENST00000358025 AP3M2P53677 418 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 PLTPP55058 493 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 LAMB3Q13751 1172 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 TCERG1LQ5VWI1 586 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CTAGE3PQ8IX95 158 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC87Q9NVE4 849 aa4.41□□□□□ -1.7
SYNE2-204ENST00000358025 ADAMTS1Q9UHI8 967 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms