RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 ACMSDQ8TDX5 336 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 AFG1LQ8WV93 481 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SHANK2Q9UPX8 1470 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TJP3O95049 919 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 OGNP20774 298 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PRKAA2P54646 552 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 ALDH18A1P54886 795 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 MYL6P60660 151 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SGSM1Q2NKQ1 1148 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TAF1BQ53T94 588 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 RBM12BQ8IXT5 1001 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 GPT2Q8TD30 523 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 ARHGEF37A1IGU5 675 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 H3BRJ5 948 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 BAG2O95816 211 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 VAV1P15498 845 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PRMT9Q6P2P2 845 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TRIM59Q8IWR1 403 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TMOD2Q9NZR1 351 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TNPO2O14787 897 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TPP2P29144 1249 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 STAG2Q8N3U4 1231 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PPWD1Q96BP3 646 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 BEGAINQ9BUH8 593 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PARP1P09874 1014 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 GFPT1Q06210 699 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 GRAMD1BQ3KR37 738 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 KHDRBS2Q5VWX1 349 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PLEKHM2Q8IWE5 1019 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 WDR97A6NE52 1622 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 LSP1P33241 339 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 NLRP14Q86W24 1093 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SPERTQ8NA61 448 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PYROXD1Q8WU10 500 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 MYL10Q9BUA6 226 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 FKBP14Q9NWM8 211 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 APPL1Q9UKG1 709 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 CENPXA8MT69 81 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PFKFB2O60825 505 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TRIM49P0CI25 452 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TRIM49CP0CI26 452 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 ERP29P30040 261 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 COG2Q14746 738 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 RASSF3Q86WH2 238 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SPICE1Q8N0Z3 855 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 KIAA0232Q92628 1395 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SKAP2O75563 359 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SERPING1P05155 500 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 POLR3DP05423 398 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PAMP19021 973 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 IGHMBP2P38935 993 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PMS2P54278 862 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PRDM4Q9UKN5 801 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 IL18RAPO95256 599 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TRIM71Q2Q1W2 868 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 CFAP70Q5T0N1 1121 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 KDM7AQ6ZMT4 941 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SIX6OS1Q8N1H7 587 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 ARL10Q8N8L6 244 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 VCPIP1Q96JH7 1222 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SLC6A15Q9H2J7 730 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PEX14O75381 377 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 RPS6KB1P23443 525 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 GEN1Q17RS7 908 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 KLHL7Q8IXQ5 586 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TCEAL7Q9BRU2 100 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PPANQ9NQ55 473 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SAR1AQ9NR31 198 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 A0A1W2PQC6 194 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 TSC22D2O75157 780 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 HNRNPH1P31943 449 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 HIC1Q14526 733 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 BORCS5Q969J3 196 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PRR23D1E9PI22 279 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PRR23D2P0DMB1 279 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 H2AFXP16104 143 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 GPTP24298 496 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 DNA2P51530 1060 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 IFIT1BQ5T764 474 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 PDIK1LQ8N165 341 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 OSBPL8Q9BZF1 889 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 UBE2OQ9C0C9 1292 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 AATFQ9NY61 560 aaKnown RBP eCLIP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 OTUD4Q01804 1114 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 RFT1Q96AA3 541 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 C19orf44Q9H6X5 657 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 AKAP5P24588 427 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 FAM83BQ5T0W9 1011 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 ING3Q9NXR8 418 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SCN3BQ9NY72 215 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 R3HDM2Q9Y2K5 976 aaKnown RBP4.98□□□□□ -1.61
SYNE2-203ENST00000357395 SMCO2A6NFE2 343 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 IFNA16P05015 189 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 F8A1P23610 371 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 CNTFP26441 200 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 ZNF76P36508 570 aa4.98□□□□□ -1.61
SYNE2-203ENST00000357395 GNAT3A8MTJ3 354 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 VCLP18206 1134 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 TNNI2P48788 182 aa4.97□□□□□ -1.61
SYNE2-203ENST00000357395 NCLNQ969V3 563 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms