RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 DONSONQ9NYP3 566 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 COX16Q9P0S2 106 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 GCNT4Q9P109 453 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 ZNF804BA4D1E1 1349 aa13.73□□□□□ -0.21
SMC4-202ENST00000357388 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 MAP4P27816 1152 aaKnown RBP13.72□□□□□ -0.21
SMC4-202ENST00000357388 ARMCX2Q7L311 632 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 HOMEZQ8IX15 550 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 LINC00301Q8NCQ3 95 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 PBXIP1Q96AQ6 731 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 WWP1Q9H0M0 922 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 G3BP2Q9UN86 482 aaKnown RBP13.72□□□□□ -0.21
SMC4-202ENST00000357388 ADCY3O60266 1144 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 WBP4O75554 376 aaKnown RBP13.72□□□□□ -0.21
SMC4-202ENST00000357388 TMCC1O94876 653 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 EIF4A1P60842 406 aaKnown RBP13.72□□□□□ -0.21
SMC4-202ENST00000357388 PTH1RQ03431 593 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 LOC102724159A0A0B4J2E5 919 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 CCDC78A2IDD5 438 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 FGGP02679 453 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 HSPD1P10809 573 aaKnown RBP13.72□□□□□ -0.21
SMC4-202ENST00000357388 CCND2P30279 289 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 GYG1P46976 350 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 PWP2Q15269 919 aaKnown RBP13.72□□□□□ -0.21
SMC4-202ENST00000357388 GJC2Q5T442 439 aaPredicted RBP13.72□□□□□ -0.21
SMC4-202ENST00000357388 PNMA3Q9UL41 463 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 WDR47O94967 919 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 GGPS1O95749 300 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 CCDC15Q0P6D6 951 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 HIC1Q14526 733 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 APOA5Q6Q788 366 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 RASSF3Q86WH2 238 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 AP1M1Q9BXS5 423 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 SLITRK6Q9H5Y7 841 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 LRRC4Q9HBW1 653 aa13.72□□□□□ -0.21
SMC4-202ENST00000357388 INPP5AQ14642 412 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 SLC44A4Q53GD3 710 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 ZNF280CQ8ND82 737 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 ASCC2Q9H1I8 757 aaPredicted RBP13.71□□□□□ -0.21
SMC4-202ENST00000357388 MAPKBP1O60336 1514 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 hCG_2014768A0A024R1R8 64 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 GFPT2O94808 682 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 SRGAP2CP0DJJ0 459 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 CDH2P19022 906 aaPredicted RBP13.71□□□□□ -0.21
SMC4-202ENST00000357388 STAP2Q9UGK3 403 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 ARL2BPQ9Y2Y0 163 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 SORBS3O60504 671 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 BBOX1O75936 387 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 NT5C2P49902 561 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 MAP4K1Q92918 833 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 ZNF577Q9BSK1 485 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 LSG1Q9H089 658 aaKnown RBP13.71□□□□□ -0.21
SMC4-202ENST00000357388 NDST4Q9H3R1 872 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 CCDC134Q9H6E4 229 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.21
SMC4-202ENST00000357388 CHRNA3P32297 505 aa13.71□□□□□ -0.22
SMC4-202ENST00000357388 ADD1P35611 737 aaKnown RBP13.71□□□□□ -0.22
SMC4-202ENST00000357388 GOLGA8FQ08AF8 430 aa13.71□□□□□ -0.22
SMC4-202ENST00000357388 GOLGA8DPQ0D2H9 430 aa13.71□□□□□ -0.22
SMC4-202ENST00000357388 KRR1Q13601 381 aaKnown RBP13.71□□□□□ -0.22
SMC4-202ENST00000357388 GID8Q9NWU2 228 aa13.71□□□□□ -0.22
SMC4-202ENST00000357388 SYCP2Q9BX26 1530 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 E7ENQ6 273 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 M0R2C6 588 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 SOX5P35711 763 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 RNF139Q8WU17 664 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 FAF2Q96CS3 445 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 TUBGCP3Q96CW5 907 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 NDUFA13Q9P0J0 144 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 COL17A1Q9UMD9 1497 aaPredicted RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 CIITAP33076 1130 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 EPHB1P54762 984 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 CHRNDQ07001 517 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 PKP1Q13835 747 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 TFDP2Q14188 446 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 ALKBH5Q6P6C2 394 aaKnown RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 SLC26A7Q8TE54 656 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 EPN3Q9H201 632 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 DHX36Q9H2U1 1008 aaKnown RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 TAF1DQ9H5J8 278 aaPredicted RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 KMT5AQ9NQR1 393 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 KRT16P08779 473 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 UBE3CQ15386 1083 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 LRIG3Q6UXM1 1119 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 MOV10L1Q9BXT6 1211 aaKnown RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 OSBPL5Q9H0X9 879 aaPredicted RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 CYP26B1Q9NR63 512 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 CEP72Q9P209 647 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 PALD1Q9ULE6 856 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 SRPRBQ9Y5M8 271 aaKnown RBP13.7□□□□□ -0.22
SMC4-202ENST00000357388 SESN1Q9Y6P5 492 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 TTLL1O95922 423 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 SERPINB1P30740 379 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 BCAMP50895 628 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 GANCQ8TET4 914 aa13.7□□□□□ -0.22
SMC4-202ENST00000357388 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.7□□□□□ -0.226e-8■■■■□ 23.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms