RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CCDC194A0A1B0GVG4 234 aa18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 M0QZ92 97 aa18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 IBSPP21815 317 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 JAK3P52333 1124 aa18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 NFX1Q12986 1120 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 SKIV2LQ15477 1246 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 EFCAB12Q6NXP0 572 aa18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 FAM177A1Q8N128 213 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 ZNF579Q8NAF0 562 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 ATXN2LQ8WWM7 1075 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 ST3GAL5Q9UNP4 418 aa18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 MRPL42Q9Y6G3 142 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-201ENST00000355572 BTBD18B2RXH4 712 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 H3BNC9 293 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 RPS6KA5O75582 802 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 FGFR4P22455 802 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 SFNP31947 248 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 NLRP11P59045 1033 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 SPIRE1Q08AE8 756 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 GPM6BQ13491 265 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 DSC3Q14574 896 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 MTERF2Q49AM1 385 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 PAN2Q504Q3 1202 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 PLA2G4FQ68DD2 849 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 TCEAL9Q9UHQ7 104 aa18.85■□□□□ 0.61
PDLIM7-201ENST00000355572 GRM6O15303 877 aa18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 CCNT1O60563 726 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 CSDE1O75534 798 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 RPLP2P05387 115 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 BMP1P13497 986 aa18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 MRPS5P82675 430 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 PPP2R5CQ13362 524 aa18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 PPP4R3AQ6IN85 833 aa18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 ANO5Q75V66 913 aa18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 CCDC83Q8IWF9 413 aa18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 FIBCD1Q8N539 461 aa18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 FAM167AQ96KS9 214 aa18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 SEPT9Q9UHD8 586 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-201ENST00000355572 C9IYK1 514 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 ZBTB39O15060 712 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 CSPG5O95196 566 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 MMP1P03956 469 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 CTNNB1P35222 781 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 KRT2P35908 639 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 CRYBB1P53674 252 aaPredicted RBP18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 NPEPPSP55786 919 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 GUCY1B3Q02153 619 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 CAMK1Q14012 370 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 NPAS4Q8IUM7 802 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 RDM1Q8NG50 284 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 CLP1Q92989 425 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 ADAM2Q99965 735 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 NIFKQ9BYG3 293 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 RNF19AQ9NV58 838 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 RGL1Q9NZL6 768 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 AKT3Q9Y243 479 aa18.83■□□□□ 0.6
PDLIM7-201ENST00000355572 IGKV6-21A0A0C4DH24 114 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 DNAJB1P25685 340 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 BMPR1AP36894 532 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 GPC3P51654 580 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 BTG3Q14201 252 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 FAM102BQ5T8I3 360 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 ADAMTS19Q8TE59 1207 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 FTHL17Q9BXU8 183 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 RGS18Q9NS28 235 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 NRBP2Q9NSY0 501 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 LMCD1Q9NZU5 365 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 CEP131Q9UPN4 1083 aa18.82■□□□□ 0.6
PDLIM7-201ENST00000355572 C5orf67F2Z3F1 127 aa18.81■□□□□ 0.6
PDLIM7-201ENST00000355572 MAGEB2O15479 319 aa18.81■□□□□ 0.6
PDLIM7-201ENST00000355572 SARSP49591 514 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-201ENST00000355572 XKR3Q5GH77 459 aa18.81■□□□□ 0.6
PDLIM7-201ENST00000355572 KSR1Q8IVT5 923 aa18.81■□□□□ 0.6
PDLIM7-201ENST00000355572 DIS3L2Q8IYB7 885 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-201ENST00000355572 MRPL38Q96DV4 380 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-201ENST00000355572 SAMD11Q96NU1 681 aa18.81■□□□□ 0.6
PDLIM7-201ENST00000355572 ALG13Q9NP73 1137 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-201ENST00000355572 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 FGFR1P11362 822 aa18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 GCFC2P16383 781 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 XBP1P17861 261 aa18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 TBC1D8BQ0IIM8 1120 aa18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 TCEAL5Q5H9L2 206 aa18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 CMTR2Q8IYT2 770 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 DYDC2Q96IM9 177 aa18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 FAM20AQ96MK3 541 aa18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 TMEM60Q9H2L4 133 aa18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 BMP2KQ9NSY1 1161 aaPredicted RBP18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 PCDHGC5Q9Y5F6 944 aa18.8■□□□□ 0.6
PDLIM7-201ENST00000355572 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-201ENST00000355572 DARSP14868 501 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-201ENST00000355572 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.69e-6■□□□□ 8.8
PDLIM7-201ENST00000355572 PSMC5P62195 406 aa18.79■□□□□ 0.6
PDLIM7-201ENST00000355572 CTTNQ14247 550 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-201ENST00000355572 NCAPH2Q6IBW4 605 aa18.79■□□□□ 0.6
PDLIM7-201ENST00000355572 WASF1Q92558 559 aa18.79■□□□□ 0.6
PDLIM7-201ENST00000355572 HLA-CQ95604 372 aa18.79■□□□□ 0.6
PDLIM7-201ENST00000355572 LIMCH1Q9UPQ0 1083 aa18.79■□□□□ 0.6
PDLIM7-201ENST00000355572 TTC28Q96AY4 2481 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms