RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 GTPBP10A4D1E9 387 aaKnown RBP18.96■□□□□ 0.63
VPS13B-201ENST00000355155 NR3C1P04150 777 aa18.96■□□□□ 0.63
VPS13B-201ENST00000355155 GOLGA8FQ08AF8 430 aa18.96■□□□□ 0.63
VPS13B-201ENST00000355155 GOLGA8DPQ0D2H9 430 aa18.96■□□□□ 0.63
VPS13B-201ENST00000355155 NEDD9Q14511 834 aa18.96■□□□□ 0.63
VPS13B-201ENST00000355155 NCAPG2Q86XI2 1143 aa18.96■□□□□ 0.63
VPS13B-201ENST00000355155 NELFCDQ8IXH7 590 aa18.96■□□□□ 0.63
VPS13B-201ENST00000355155 CEP89Q96ST8 783 aa18.96■□□□□ 0.63
VPS13B-201ENST00000355155 PKD2L1Q9P0L9 805 aa18.96■□□□□ 0.63
VPS13B-201ENST00000355155 KCNG1Q9UIX4 513 aa18.96■□□□□ 0.63
VPS13B-201ENST00000355155 POTEJP0CG39 1038 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 NR2F2P24468 414 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 DPY19L2P1Q6NXN4 242 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 LUC7L2Q9Y383 392 aaKnown RBP18.95■□□□□ 0.62
VPS13B-201ENST00000355155 PAXBP1Q9Y5B6 917 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 MYH9P35579 1960 aaKnown RBP18.95■□□□□ 0.62
VPS13B-201ENST00000355155 NMT1P30419 496 aaKnown RBP18.95■□□□□ 0.62
VPS13B-201ENST00000355155 KCNMA1Q12791 1236 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 XKR3Q5GH77 459 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 SYN2Q92777 582 aaPredicted RBP18.95■□□□□ 0.62
VPS13B-201ENST00000355155 KIFAP3Q92845 792 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 FBXL5Q9UKA1 691 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 PPP2R2CQ9Y2T4 447 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 SAMM50Q9Y512 469 aa18.95■□□□□ 0.62
VPS13B-201ENST00000355155 FARP2O94887 1054 aaPredicted RBP18.94■□□□□ 0.62
VPS13B-201ENST00000355155 KRT9P35527 623 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 FSTL1Q12841 308 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 ODR4Q5SWX8 454 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 MMP19Q99542 508 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 BCAS3Q9H6U6 928 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 GABBR1Q9UBS5 961 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 LGR5O75473 907 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 DGAT1O75907 488 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 UBA1P22314 1058 aaKnown RBP18.94■□□□□ 0.62
VPS13B-201ENST00000355155 GTF2F1P35269 517 aaKnown RBP eCLIP18.94■□□□□ 0.622e-7■■■■■ 26.9
VPS13B-201ENST00000355155 MAP1SQ66K74 1059 aaPredicted RBP18.94■□□□□ 0.62
VPS13B-201ENST00000355155 RAD9BQ6WBX8 426 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 CCDC60Q8IWA6 550 aaPredicted RBP18.94■□□□□ 0.62
VPS13B-201ENST00000355155 PLCB1Q9NQ66 1216 aa18.94■□□□□ 0.62
VPS13B-201ENST00000355155 RBM47A0AV96 593 aaKnown RBP18.93■□□□□ 0.62
VPS13B-201ENST00000355155 PTPN14Q15678 1187 aa18.93■□□□□ 0.62
VPS13B-201ENST00000355155 CCDC40Q4G0X9 1142 aa18.93■□□□□ 0.62
VPS13B-201ENST00000355155 SPRYD7Q5W111 196 aa18.93■□□□□ 0.62
VPS13B-201ENST00000355155 WDR59Q6PJI9 974 aa18.93■□□□□ 0.62
VPS13B-201ENST00000355155 MCPH1Q8NEM0 835 aa18.93■□□□□ 0.62
VPS13B-201ENST00000355155 ZHX3Q9H4I2 956 aa18.93■□□□□ 0.62
VPS13B-201ENST00000355155 ADGRG1Q9Y653 693 aa18.93■□□□□ 0.62
VPS13B-201ENST00000355155 NUCKS1Q9H1E3 243 aaKnown RBP18.93■□□□□ 0.62
VPS13B-201ENST00000355155 AGPAT3Q9NRZ7 376 aa18.93■□□□□ 0.62
VPS13B-201ENST00000355155 GSTTP1A0A1W2PQM5 241 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 TNNT1P13805 278 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 CCNA1P78396 465 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 IRF5Q13568 498 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 PPP2R5AQ15172 486 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 ZNF792Q3KQV3 632 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 CCDC62Q6P9F0 684 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 METTL7BQ6UX53 244 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 BRI3BPQ8WY22 251 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 BAP1Q92560 729 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 ACCSQ96QU6 501 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 GBP3Q9H0R5 595 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 BTBD19C9JJ37 291 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 PMM2O15305 246 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 AKAP3O75969 853 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 TARBP2Q15633 366 aaKnown RBP18.92■□□□□ 0.62
VPS13B-201ENST00000355155 TRIM65Q6PJ69 517 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 CCDC170Q8IYT3 715 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 C2orf69Q8N8R5 385 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 GPRC5AQ8NFJ5 357 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 PAGR1Q9BTK6 254 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 DDX41Q9UJV9 622 aaKnown RBP18.92■□□□□ 0.62
VPS13B-201ENST00000355155 MYO6Q9UM54 1294 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 PLAGL2Q9UPG8 496 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.92■□□□□ 0.62
VPS13B-201ENST00000355155 PHLPP2Q6ZVD8 1323 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 ADGRA2Q96PE1 1338 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 ATP4AP20648 1035 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 KCTD2Q14681 263 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 ARMCX3Q9UH62 379 aaPredicted RBP18.92■□□□□ 0.62
VPS13B-201ENST00000355155 CLEC11AQ9Y240 323 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 USP20Q9Y2K6 914 aa18.92■□□□□ 0.62
VPS13B-201ENST00000355155 DIS3Q9Y2L1 958 aaKnown RBP18.92■□□□□ 0.62
VPS13B-201ENST00000355155 ASB14A6NK59 587 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 SFI1A8K8P3 1242 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 STRNO43815 780 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 EPB41P11171 864 aaKnown RBP18.91■□□□□ 0.62
VPS13B-201ENST00000355155 PSMC2P35998 433 aaKnown RBP18.91■□□□□ 0.62
VPS13B-201ENST00000355155 PRKCEQ02156 737 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 XKR9Q5GH70 373 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 SWSAP1Q6NVH7 229 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 PCYT2Q99447 389 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 R3HDMLQ9H3Y0 253 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 CYP26B1Q9NR63 512 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 CEP72Q9P209 647 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 PDHXO00330 501 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 PEX10O60683 326 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 LCA5LO95447 670 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 KCNA1Q09470 495 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 TOGARAM2Q6ZUX3 1019 aa18.91■□□□□ 0.62
VPS13B-201ENST00000355155 ZNF397Q8NF99 534 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms