RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TLDC2A0PJX2 215 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 POTEFA5A3E0 1075 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 FGFR1OPO95684 399 aaKnown RBP10.19□□□□□ -0.78
SMG6-202ENST00000354901 TTLL1O95922 423 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 POLD1P28340 1107 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 FXR2P51116 673 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMG6-202ENST00000354901 ICA1Q05084 483 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 ZNF543Q08ER8 600 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 IFFO1Q0D2I5 559 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 KCNMA1Q12791 1236 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 PLCB4Q15147 1175 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 USH1GQ495M9 461 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 CHADLQ6NUI6 762 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 POTEGQ6S5H5 508 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 ZFPM1Q8IX07 1006 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 TBC1D5Q92609 795 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 RBM17Q96I25 401 aaKnown RBP10.19□□□□□ -0.78
SMG6-202ENST00000354901 ATP6V1G3Q96LB4 118 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 RBM12Q9NTZ6 932 aaKnown RBP10.19□□□□□ -0.78
SMG6-202ENST00000354901 ADAMTS1Q9UHI8 967 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 COL4A3BPQ9Y5P4 624 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 PNMA6FA0A0J9YX94 578 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 ANO9A1A5B4 782 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 SMNDC1O75940 238 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMG6-202ENST00000354901 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
SMG6-202ENST00000354901 GYS1P13807 737 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 PPP1R2P41236 205 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 CRY2Q49AN0 593 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 LRRC23Q53EV4 343 aaPredicted RBP10.19□□□□□ -0.78
SMG6-202ENST00000354901 ALS2CLQ60I27 953 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 FAM47EQ6ZV65 393 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 LONP2Q86WA8 852 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 ERICH1Q86X53 443 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 CERS5Q8N5B7 392 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 FAM133AQ8N9E0 248 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 KLHL23Q8NBE8 558 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 BAP1Q92560 729 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 EPAS1Q99814 870 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 BATF3Q9NR55 127 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMG6-202ENST00000354901 LRRC37AA6NMS7 1700 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 A0A1W2PQJ5 194 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 SPDYE5A6NIY4 337 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 GCOM1H8Y6P7 765 aaPredicted RBP10.18□□□□□ -0.78
SMG6-202ENST00000354901 MYZAPP0CAP1 466 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 SETSIPP0DME0 302 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 ACTN1P12814 892 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 IL1R1P14778 569 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 KCNJ2P63252 427 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 FKBP3Q00688 224 aaKnown RBP10.18□□□□□ -0.78
SMG6-202ENST00000354901 CYP4A11Q02928 519 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 FAM83BQ5T0W9 1011 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 TCERG1LQ5VWI1 586 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 PDXDC1Q6P996 788 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 SLC17A8Q8NDX2 589 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 TEKT4Q8WW24 435 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 KRT12Q99456 494 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 PACSIN1Q9BY11 444 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 BCAS3Q9H6U6 928 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 ARHGEF10LQ9HCE6 1279 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 NAV1Q8NEY1 1877 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 ESYT2A0FGR8 921 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 ANKRD33BA6NCL7 494 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 TRIM37O94972 964 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 LINGO3P0C6S8 592 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 PLA2G4BP0C869 781 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 LRRC63Q05C16 580 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 PABPC4Q13310 644 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMG6-202ENST00000354901 PRR16Q569H4 304 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 FIGNQ5HY92 759 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 UHMK1Q8TAS1 419 aaKnown RBP10.18□□□□□ -0.78
SMG6-202ENST00000354901 DNAJC19Q96DA6 116 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 ZC3H12CQ9C0D7 883 aaKnown RBP10.18□□□□□ -0.78
SMG6-202ENST00000354901 CHCHD3Q9NX63 227 aaKnown RBP10.18□□□□□ -0.78
SMG6-202ENST00000354901 HYOU1Q9Y4L1 999 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 PCDHA1Q9Y5I3 950 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 QSER1Q2KHR3 1735 aa10.18□□□□□ -0.78
SMG6-202ENST00000354901 KLRG2A4D1S0 409 aaPredicted RBP10.17□□□□□ -0.78
SMG6-202ENST00000354901 MAP3K13O43283 966 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 GLI1P08151 1106 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 PAK2Q13177 524 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 SFMBT2Q5VUG0 894 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 YTHDF3Q7Z739 585 aaKnown RBP10.17□□□□□ -0.78
SMG6-202ENST00000354901 RPGRIP1Q96KN7 1286 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 PURBQ96QR8 312 aaKnown RBP10.17□□□□□ -0.78
SMG6-202ENST00000354901 CRAMP1Q96RY5 1269 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 ELAC2Q9BQ52 826 aaKnown RBP10.17□□□□□ -0.78
SMG6-202ENST00000354901 RIC8AQ9NPQ8 531 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 KCNQ5Q9NR82 932 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 ZFATQ9P243 1243 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 LRRD1A4D1F6 860 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 H0Y3Z8 333 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 TLR2O60603 784 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 CTNND1O60716 968 aaKnown RBP10.17□□□□□ -0.78
SMG6-202ENST00000354901 PALMO75781 387 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 BBOX1O75936 387 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 ATP4AP20648 1035 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 HOXA10P31260 410 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms