RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ZNF157P51786 506 aaPredicted RBP11.08□□□□□ -0.64
SYNE1-203ENST00000354674 ARHGEF16Q5VV41 709 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 IWS1Q96ST2 819 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 PAGR1Q9BTK6 254 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 R3HDMLQ9H3Y0 253 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 MROH8Q9H579 483 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 HAUS2Q9NVX0 235 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 BAIAP2L1Q9UHR4 511 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 TFR2Q9UP52 801 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 ASTN1O14525 1302 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 LRRC37A2A6NM11 1700 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 MANSC4A6NHS7 340 aaPredicted RBP11.07□□□□□ -0.64
SYNE1-203ENST00000354674 FOXN1O15353 648 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 ARP10275 920 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 EZRP15311 586 aaKnown RBP11.07□□□□□ -0.64
SYNE1-203ENST00000354674 EIF2AK2P19525 551 aaKnown RBP11.07□□□□□ -0.64
SYNE1-203ENST00000354674 GRB10Q13322 594 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 PPP2R5CQ13362 524 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 POSTNQ15063 836 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 TMEM119Q4V9L6 283 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 LMBR1Q8WVP7 490 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 PNMA5Q96PV4 448 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 MTRQ99707 1265 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 MAGEF1Q9HAY2 307 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 HDAC6Q9UBN7 1215 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 STK24Q9Y6E0 443 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 ADGRA2Q96PE1 1338 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 DNAJC25-GNG10A0A024R161 153 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 A0A1B0GVG6 124 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 STAM2O75886 525 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 NR3C2P08235 984 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 MYO1EQ12965 1108 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 OTOP1Q7RTM1 612 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 SLC35F6Q8N357 371 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 FAM133AQ8N9E0 248 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 SLC40A1Q9NP59 571 aa11.07□□□□□ -0.64
SYNE1-203ENST00000354674 HOOK1Q9UJC3 728 aaKnown RBP11.07□□□□□ -0.64
SYNE1-203ENST00000354674 TOMM70O94826 608 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CAVIN2O95810 425 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 EDNRBP24530 442 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CCND2P30279 289 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 MATR3P43243 847 aaKnown RBP eCLIP11.06□□□□□ -0.64
SYNE1-203ENST00000354674 FNTAP49354 379 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 PNOCQ13519 176 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CRYMQ14894 314 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 RBBP5Q15291 538 aaKnown RBP11.06□□□□□ -0.64
SYNE1-203ENST00000354674 ZKSCAN8Q15776 578 aaPredicted RBP11.06□□□□□ -0.64
SYNE1-203ENST00000354674 RRAGBQ5VZM2 374 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 NCAPG2Q86XI2 1143 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CEP112Q8N8E3 955 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 ARL10Q8N8L6 244 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 GPRC5AQ8NFJ5 357 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 INPP4AQ96PE3 977 aaPredicted RBP11.06□□□□□ -0.64
SYNE1-203ENST00000354674 PARK7Q99497 189 aaKnown RBP11.06□□□□□ -0.64
SYNE1-203ENST00000354674 RIT2Q99578 217 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 NUDT12Q9BQG2 462 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 WDR11Q9BZH6 1224 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 KCNH7Q9NS40 1196 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 KBTBD4Q9NVX7 518 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CTAGE15A4D2H0 777 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 DHX15O43143 795 aaKnown RBP11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CCP110O43303 1012 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 RTN2O75298 545 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CTAGE8P0CG41 777 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 PLCG1P19174 1290 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 GUCY1A3Q02108 690 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 APBA1Q02410 837 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 DPYDQ12882 1025 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CTAGE6Q86UF2 777 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CTAGE4Q8IX94 777 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 ANKRD35Q8N283 1001 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 AGO4Q9HCK5 861 aaKnown RBP11.06□□□□□ -0.64
SYNE1-203ENST00000354674 MAFGO15525 162 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 MARCH6O60337 910 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 PRPF6O94906 941 aaKnown RBP11.06□□□□□ -0.64
SYNE1-203ENST00000354674 GRIK3Q13003 919 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 ECM1Q16610 540 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 KRT79Q5XKE5 535 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 CCDC13Q8IYE1 715 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 RPUSD2Q8IZ73 545 aaKnown RBP11.06□□□□□ -0.64
SYNE1-203ENST00000354674 GPRASP2Q96D09 838 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 FGD4Q96M96 766 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 ZNF577Q9BSK1 485 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 L3MBTL1Q9Y468 752 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 PCDHA5Q9Y5H7 936 aa11.06□□□□□ -0.64
SYNE1-203ENST00000354674 TMEM88BA6NKF7 163 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 IPO5O00410 1097 aaKnown RBP11.05□□□□□ -0.64
SYNE1-203ENST00000354674 RGS20O76081 388 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 SNUPNO95149 360 aaKnown RBP11.05□□□□□ -0.64
SYNE1-203ENST00000354674 MYL1P05976 194 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 STAT6P42226 847 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 CNTN2Q02246 1040 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 FSTL1Q12841 308 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 SPRED3Q2MJR0 410 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 FAM228AQ86W67 206 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 TRMT44Q8IYL2 757 aaKnown RBP11.05□□□□□ -0.64
SYNE1-203ENST00000354674 GRAMD1CQ8IYS0 662 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 KCTD17Q8N5Z5 321 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 SAAL1Q96ER3 474 aa11.05□□□□□ -0.64
SYNE1-203ENST00000354674 CALML4Q96GE6 196 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms