RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SEC23AQ15436 765 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 ZC2HC1CQ53FD0 456 aaPredicted RBP14.82□□□□□ -0.04
SMC6-201ENST00000351948 FBXO41Q8TF61 875 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 TYW1Q9NV66 732 aaKnown RBP14.82□□□□□ -0.04
SMC6-201ENST00000351948 LGALS16A8MUM7 142 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 MFAP3LO75121 409 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 TUBBP07437 444 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 GNAT1P11488 350 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 BACE1P56817 501 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 EVX2Q03828 476 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 MICALCLQ6ZW33 695 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 MAGED2Q9UNF1 606 aaPredicted RBP14.82□□□□□ -0.04
SMC6-201ENST00000351948 H7C0C1 242 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 TCP1P17987 556 aaKnown RBP14.82□□□□□ -0.04
SMC6-201ENST00000351948 ATP5OP48047 213 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 MXRA7P84157 204 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 PDIA5Q14554 519 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 FAM76AQ8TAV0 307 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 KRT12Q99456 494 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 ZBED2Q9BTP6 218 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 CALN1Q9BXU9 219 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 VCAM1P19320 739 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 CEP57Q86XR8 500 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 RRAGCQ9HB90 399 aa14.82□□□□□ -0.04
SMC6-201ENST00000351948 A6NJR5 290 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 CETPP11597 493 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 ACOT2P49753 483 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 FMR1Q06787 632 aaKnown RBP eCLIP14.81□□□□□ -0.041e-6■■■■□ 21.4
SMC6-201ENST00000351948 CERS5Q8N5B7 392 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 MICAL1Q8TDZ2 1067 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 NFIBO00712 420 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 RGL2O15211 777 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 VAMP7P51809 220 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 ZNF699Q32M78 642 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 CDR2LQ86X02 465 aaPredicted RBP14.81□□□□□ -0.04
SMC6-201ENST00000351948 GOLGA6BA6NDN3 693 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 SERPING1P05155 500 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 ZNF18P17022 549 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 ORC2Q13416 577 aaPredicted RBP14.81□□□□□ -0.04
SMC6-201ENST00000351948 WHAMMP3Q1A5X7 153 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 CCDC144BQ3MJ40 725 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 RFX6Q8HWS3 928 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 MXRA8Q9BRK3 442 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 CCSER1Q9C0I3 900 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 POLIQ9UNA4 740 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 PCDHA13Q9Y5I0 950 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 ADGRB2O60241 1585 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 KIF1AQ12756 1690 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 VIMP08670 466 aaKnown RBP14.81□□□□□ -0.04
SMC6-201ENST00000351948 KRT15P19012 456 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 GUCY2DQ02846 1103 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 GEN1Q17RS7 908 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 GUF1Q8N442 669 aaKnown RBP14.81□□□□□ -0.04
SMC6-201ENST00000351948 DPF2Q92785 391 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 NKIRAS1Q9NYS0 192 aa14.81□□□□□ -0.04
SMC6-201ENST00000351948 LDHAP00338 332 aaKnown RBP14.8□□□□□ -0.04
SMC6-201ENST00000351948 MAPK8IP2Q13387 824 aaPredicted RBP14.8□□□□□ -0.04
SMC6-201ENST00000351948 KRT71Q3SY84 523 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 TOGARAM2Q6ZUX3 1019 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 DHX40Q8IX18 779 aaKnown RBP14.8□□□□□ -0.04
SMC6-201ENST00000351948 SUCLA2Q9P2R7 463 aaPredicted RBP14.8□□□□□ -0.04
SMC6-201ENST00000351948 FAM205AQ6ZU69 1335 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 ZBBXA8MT70 800 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 HOXD10P28358 340 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 TM4SF1P30408 202 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 PRKCEQ02156 737 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 PPFIA1Q13136 1202 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 SEPT1Q8WYJ6 367 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 MAGOHBQ96A72 148 aaKnown RBP14.8□□□□□ -0.04
SMC6-201ENST00000351948 RBAKQ9NYW8 714 aaPredicted RBP14.8□□□□□ -0.04
SMC6-201ENST00000351948 KIFC3Q9BVG8 833 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 TOPORSQ9NS56 1045 aaPredicted RBP14.8□□□□□ -0.04
SMC6-201ENST00000351948 MYBP10242 640 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 SIX6OS1Q8N1H7 587 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 MIS12Q9H081 205 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 ZFYVE28Q9HCC9 887 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 AGO2Q9UKV8 859 aaKnown RBP14.8□□□□□ -0.04
SMC6-201ENST00000351948 EMSYQ7Z589 1322 aa14.8□□□□□ -0.04
SMC6-201ENST00000351948 RFX1P22670 979 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 COPB2P35606 906 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 ITIH3Q06033 890 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 SLC38A10Q9HBR0 1119 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 PRDM5Q9NQX1 630 aaPredicted RBP14.79□□□□□ -0.04
SMC6-201ENST00000351948 BUB1BO60566 1050 aaPredicted RBP14.79□□□□□ -0.04
SMC6-201ENST00000351948 GFPT1Q06210 699 aaPredicted RBP14.79□□□□□ -0.04
SMC6-201ENST00000351948 NAALADL2Q58DX5 795 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 CCNYQ8ND76 341 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 MRPL4Q9BYD3 311 aaKnown RBP14.79□□□□□ -0.04
SMC6-201ENST00000351948 NGRNQ9NPE2 291 aaKnown RBP14.79□□□□□ -0.04
SMC6-201ENST00000351948 LRRD1A4D1F6 860 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 MSH4O15457 936 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 ICAM1P05362 532 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 XKR3Q5GH77 459 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 MGARPQ8TDB4 240 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 RAB17Q9H0T7 212 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 TUFT1Q9NNX1 390 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 PIN4Q9Y237 131 aaKnown RBP14.79□□□□□ -0.04
SMC6-201ENST00000351948 TMX2Q9Y320 296 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 TTC26A0AVF1 554 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms