RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CELF4Q9BZC1 486 aaKnown RBP11.51□□□□□ -0.57
CAPN3-203ENST00000349748 GOLPH3Q9H4A6 298 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 EXOC1Q9NV70 894 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 UBAP1Q9NZ09 502 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 STOML1Q9UBI4 398 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 UTYO14607 1347 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 MAST3O60307 1309 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 SPDYE16A6NNV3 312 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-203ENST00000349748 KCNK3O14649 394 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 OR6B1O95007 311 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 PIP4K2AP48426 406 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-203ENST00000349748 SULT2A1Q06520 285 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 PARP6Q2NL67 630 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.5□□□□□ -0.57
CAPN3-203ENST00000349748 TBC1D9BQ66K14 1250 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 PHLDB3Q6NSJ2 640 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 VSIG1Q86XK7 387 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 FBXL16Q8N461 479 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 NAT14Q8WUY8 206 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.5□□□□□ -0.57
CAPN3-203ENST00000349748 MYLK2Q9H1R3 596 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 LRMDAQ9H2I8 198 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 CCDC134Q9H6E4 229 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 CLIC5Q9NZA1 410 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 SUCLA2Q9P2R7 463 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-203ENST00000349748 MYH1P12882 1939 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 STK36Q9NRP7 1315 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 BCL9LQ86UU0 1499 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 HTR3EA5X5Y0 456 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 KRT36O76013 467 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 NFKBIAP25963 317 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-203ENST00000349748 DNM2P50570 870 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 HDAC4P56524 1084 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 MAP7Q14244 749 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 CFAP157Q5JU67 520 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 OTUD6AQ7L8S5 288 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 PDCD7Q8N8D1 485 aaKnown RBP11.5□□□□□ -0.57
CAPN3-203ENST00000349748 STKLD1Q8NE28 680 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 GDAP1Q8TB36 358 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 ERP27Q96DN0 273 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 HAUS7Q99871 368 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 TUBGCP2Q9BSJ2 902 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 TRAIPQ9BWF2 469 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 KIAA1683Q9H0B3 1180 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 DHX36Q9H2U1 1008 aaKnown RBP11.5□□□□□ -0.57
CAPN3-203ENST00000349748 TUT1Q9H6E5 874 aaKnown RBP11.5□□□□□ -0.57
CAPN3-203ENST00000349748 DCLRE1BQ9H816 532 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 COL18A1P39060 1754 aa11.5□□□□□ -0.57
CAPN3-203ENST00000349748 GRID2IPA4D2P6 1211 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 TTI1O43156 1089 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 ITGA4P13612 1032 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 CD97P48960 835 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 TNNI3KQ59H18 835 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 SYDE2Q5VT97 1194 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 DAAM2Q86T65 1068 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 TEKT1Q969V4 418 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 CATSPER2Q96P56 530 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 CENPKQ9BS16 269 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 EPB41L4BQ9H329 900 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 CABP5Q9NP86 173 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 GPCPD1Q9NPB8 672 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 FAM207AQ9NSI2 230 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 TXLNGQ9NUQ3 528 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 DBR1Q9UK59 544 aaKnown RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 SUGT1Q9Y2Z0 365 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 FPGT-TNNI3KV9GXZ4 949 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 H7C1D1 291 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 EIF3FO00303 357 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 P4HA2O15460 535 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 PTCD1O75127 700 aaKnown RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 LDHAP00338 332 aaKnown RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 CREB1P16220 341 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 MTTPP55157 894 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 OCRLQ01968 901 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 WDR72Q3MJ13 1102 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 CGB2Q6NT52 195 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 RALYLQ86SE5 291 aaKnown RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 EPS8L3Q8TE67 593 aaKnown RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 UTP6Q9NYH9 597 aaKnown RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 PRKAG3Q9UGI9 489 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 TMEM59LQ9UK28 342 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 NUB1Q9Y5A7 615 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 TMEM110-MUSTN1A8MSY1 372 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 FOXO6A8MYZ6 492 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 O00370 1275 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 CAPN9O14815 690 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 SKIV2L2P42285 1042 aaKnown RBP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 GPSM2P81274 684 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 KCNMA1Q12791 1236 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 MYBPC2Q14324 1141 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 VWA3BQ502W6 1294 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 GRAMD4Q6IC98 578 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 LRRC74BQ6ZQY2 392 aa11.49□□□□□ -0.57
CAPN3-203ENST00000349748 AGGF1Q8N302 714 aaeCLIP11.49□□□□□ -0.57
CAPN3-203ENST00000349748 ANKRD42Q8N9B4 389 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms