RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 EIF5P55010 431 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 SESN3P58005 492 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 EXOSC10Q01780 885 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 GPR68Q15743 365 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 FAM69BQ5VUD6 431 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 FSTL5Q8N475 847 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 ZNF784Q8NCA9 323 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 SHCBP1Q8NEM2 672 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 THRSPQ92748 146 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 N4BP2L2Q92802 583 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 NEK1Q96PY6 1258 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 TRIM6Q9C030 488 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 LRRC27Q9C0I9 530 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 PHAXQ9H814 394 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 KAT14Q9H8E8 782 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 BAIAP2L1Q9UHR4 511 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 RRP15Q9Y3B9 282 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 CDC42BPAQ5VT25 1732 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 TMEM238LA0A1B0GVL6 79 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 A6NNZ2 444 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 H7C1W4 665 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 CPP00450 1065 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 INHAP05111 366 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 CELA3AP09093 270 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 PARP1P09874 1014 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 TNFAIP2Q03169 654 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 DCTN1Q14203 1278 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 LBRQ14739 615 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 TUBB8Q3ZCM7 444 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 FAM133BQ5BKY9 247 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 PMF1Q6P1K2 205 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 SARM1Q6SZW1 724 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 ANGPTL8Q6UXH0 198 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 BRIX1Q8TDN6 353 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 SCYL1Q96KG9 808 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 ABCG8Q9H221 673 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 DTNAQ9Y4J8 743 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 PMF1-BGLAPU3KQ54 211 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 EREGO14944 169 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 KCNQ2O43526 872 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 GMFGO60234 142 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 LDHCP07864 332 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 SLC5A1P13866 664 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 RAP2BP61225 183 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 GNG11P61952 73 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 RAC1P63000 192 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 UGT8Q16880 541 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 FAM209AQ5JX71 171 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 FKBP15Q5T1M5 1219 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 LYSMD3Q7Z3D4 306 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 IGSF22Q8N9C0 903 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 PRDM9Q9NQV7 894 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 VPS18Q9P253 973 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 FHOD1Q9Y613 1164 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 TLL2Q9Y6L7 1015 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 MED14O60244 1454 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 PLA2R1Q13018 1463 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 C2CD2LO14523 706 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 CPLX1O14810 134 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 KRT13P13646 458 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 COL19A1Q14993 1142 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 TOR2AQ5JU69 321 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 PPP1R21Q6ZMI0 780 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 FBXL6Q8N531 539 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 FSIP1Q8NA03 581 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 HSPH1Q92598 858 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 SEPT8Q92599 483 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 IL21Q9HBE4 155 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 JPH1Q9HDC5 661 aaPredicted RBP6.47□□□□□ -1.37
RFC1-201ENST00000349703 SHROOM2Q13796 1616 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 TTC41PQ6P2S7 1318 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 KCNK3O14649 394 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 MSL3P1P0C860 447 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 FDPSP14324 419 aaKnown RBP6.47□□□□□ -1.37
RFC1-201ENST00000349703 TARSP26639 723 aaKnown RBP6.47□□□□□ -1.37
RFC1-201ENST00000349703 ACTN2P35609 894 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 PCDH1Q08174 1060 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 TSGA10IPQ3SY00 556 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 DNAJC21Q5F1R6 531 aaKnown RBP6.47□□□□□ -1.37
RFC1-201ENST00000349703 PLA2G4DQ86XP0 818 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.47□□□□□ -1.37
RFC1-201ENST00000349703 PLEKHF1Q96S99 279 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 INSM2Q96T92 566 aaPredicted RBP6.47□□□□□ -1.37
RFC1-201ENST00000349703 TM6SF1Q9BZW5 370 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 ASXL2Q76L83 1435 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 RTL1A6NKG5 1358 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 CCDC163A0A0D9SF12 145 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 GOLGA6L7A0A1B0GV03 622 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 FAM221BA6H8Z2 402 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 ARHGAP33O14559 1287 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 PNMA6AP0CW24 399 aaPredicted RBP6.47□□□□□ -1.37
RFC1-201ENST00000349703 STT3AP46977 705 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 CUL4BQ13620 913 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 CCINQ13939 588 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 SPRED3Q2MJR0 410 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 SUGP1Q8IWZ8 645 aaKnown RBP6.47□□□□□ -1.37
RFC1-201ENST00000349703 EFCAB13Q8IY85 973 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 FBXO18Q8NFZ0 1043 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 CAGE1Q8TC20 777 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 CSGALNACT1Q8TDX6 532 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms