RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TBX3O15119 743 aa15.2■□□□□ 0.02
TRIM4-201ENST00000349062 NOL4O94818 638 aa15.2■□□□□ 0.02
TRIM4-201ENST00000349062 DDNO94850 711 aaPredicted RBP15.2■□□□□ 0.02
TRIM4-201ENST00000349062 RPL13P26373 211 aaKnown RBP15.2■□□□□ 0.02
TRIM4-201ENST00000349062 MOB2Q70IA6 237 aa15.2■□□□□ 0.02
TRIM4-201ENST00000349062 TEPSINQ96N21 525 aa15.2■□□□□ 0.02
TRIM4-201ENST00000349062 ABCB6Q9NP58 842 aa15.2■□□□□ 0.02
TRIM4-201ENST00000349062 AJAP1Q9UKB5 411 aaPredicted RBP15.2■□□□□ 0.02
TRIM4-201ENST00000349062 EIF3CLB5ME19 914 aaKnown RBP15.19■□□□□ 0.02
TRIM4-201ENST00000349062 TULP2O00295 520 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 CIITAP33076 1130 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 SEPT14Q6ZU15 432 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 EIF3CQ99613 913 aaKnown RBP15.19■□□□□ 0.02
TRIM4-201ENST00000349062 FRMD4BQ9Y2L6 1034 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 RRP15Q9Y3B9 282 aaKnown RBP15.19■□□□□ 0.02
TRIM4-201ENST00000349062 ASTN1O14525 1302 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 PDE2AO00408 941 aaPredicted RBP15.19■□□□□ 0.02
TRIM4-201ENST00000349062 PPP1R12BO60237 982 aaPredicted RBP15.19■□□□□ 0.02
TRIM4-201ENST00000349062 GCLMP48507 274 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 CYFIP1Q7L576 1253 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 U2AF1L4Q8WU68 220 aaKnown RBP15.19■□□□□ 0.02
TRIM4-201ENST00000349062 SIPA1L1O43166 1804 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
TRIM4-201ENST00000349062 TRAF1Q13077 416 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 MEA1Q16626 185 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 HYIQ5T013 277 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 ADAT2Q7Z6V5 191 aaKnown RBP15.19■□□□□ 0.02
TRIM4-201ENST00000349062 GOLGA6L1Q8N7Z2 621 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 CBWD1Q9BRT8 395 aa15.19■□□□□ 0.02
TRIM4-201ENST00000349062 TGFB1I1O43294 461 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 UCHL3P15374 230 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 KLRC1P26715 233 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 PTK2Q05397 1052 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 C1orf186Q6ZWK4 172 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 CLEC4DQ8WXI8 215 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 RABGGTAQ92696 567 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 SLC5A5Q92911 643 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 MBOAT7Q96N66 472 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 GBP3Q9H0R5 595 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 TYW1Q9NV66 732 aaKnown RBP15.18■□□□□ 0.02
TRIM4-201ENST00000349062 WDR46O15213 610 aaKnown RBP15.18■□□□□ 0.02
TRIM4-201ENST00000349062 MOXD1Q6UVY6 613 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 NLRX1Q86UT6 975 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 CCDC170Q8IYT3 715 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 BICD1Q96G01 975 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 ALS2CR12Q96Q35 445 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 POLR3CQ9BUI4 534 aaPredicted RBP15.18■□□□□ 0.02
TRIM4-201ENST00000349062 TSPYL1Q9H0U9 437 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 ANKZF1Q9H8Y5 726 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 ZNF408Q9H9D4 720 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 TMEM110-MUSTN1A8MSY1 372 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 PIK3CDO00329 1044 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 PTGER2P43116 358 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 DLG4P78352 724 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
TRIM4-201ENST00000349062 ZNF746Q6NUN9 644 aaPredicted RBP15.18■□□□□ 0.02
TRIM4-201ENST00000349062 GADL1Q6ZQY3 521 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 PHLDB2Q86SQ0 1253 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 CEP63Q96MT8 703 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 POP1Q99575 1024 aaKnown RBP15.18■□□□□ 0.02
TRIM4-201ENST00000349062 ACP6Q9NPH0 428 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 CEP72Q9P209 647 aa15.18■□□□□ 0.02
TRIM4-201ENST00000349062 PALMO75781 387 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 PON1P27169 355 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 YWHABP31946 246 aaKnown RBP15.17■□□□□ 0.02
TRIM4-201ENST00000349062 SWSAP1Q6NVH7 229 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 GBP6Q6ZN66 633 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 GABBR1Q9UBS5 961 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 PPP1R9AQ9ULJ8 1098 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 C10orf71Q711Q0 1435 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 FOCADQ5VW36 1801 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 DLATP10515 647 aaKnown RBP15.17■□□□□ 0.02
TRIM4-201ENST00000349062 PRPF4BQ13523 1007 aaKnown RBP15.17■□□□□ 0.02
TRIM4-201ENST00000349062 EPHA7Q15375 998 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 RSRC2Q7L4I2 434 aaKnown RBP15.17■□□□□ 0.02
TRIM4-201ENST00000349062 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 CEP170P1Q96L14 293 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 MTFR1LQ9H019 292 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
TRIM4-201ENST00000349062 VWA5AO00534 786 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 ERLIN1O75477 346 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 GNA14O95837 355 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 CALCAP01258 141 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 CYP3A4P08684 503 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 MTERF2Q49AM1 385 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 CBWD6Q4V339 395 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 CBWD3Q5JTY5 395 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 CBWD5Q5RIA9 395 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 MCF2L2Q86YR7 1114 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 ANKRD35Q8N283 1001 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 SLC16A10Q8TF71 515 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 SEPT9Q9UHD8 586 aaPredicted RBP15.16■□□□□ 0.02
TRIM4-201ENST00000349062 CTNND1O60716 968 aaKnown RBP15.16■□□□□ 0.02
TRIM4-201ENST00000349062 ACTN2P35609 894 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 PSMC2P35998 433 aaKnown RBP15.16■□□□□ 0.02
TRIM4-201ENST00000349062 QARSP47897 775 aaKnown RBP15.16■□□□□ 0.02
TRIM4-201ENST00000349062 TGFB2P61812 414 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 PGM5Q15124 567 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 HDAC7Q8WUI4 952 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 SLC38A10Q9HBR0 1119 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms